Pre_GI: BLASTP Hits

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Query: NC_011083:338910:346859 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 346859, End: 347122, Length: 264

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:332060:339302339302339577276Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein4e-37152
NC_016857:329849:338806338806339081276Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein4e-37152
NC_016856:332771:340013340013340288276Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein4e-37152
NC_003197:332086:339328339328339603276Salmonella typhimurium LT2, complete genomehypothetical protein4e-37152
NC_011080:333121:341372341372341647276Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein8e-35145
NC_016860:332087:339329339329339556228Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein8e-28122
NC_011149:309556:318927318927319184258Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-21102
NC_006905:326517:332206332206332463258Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein2e-1994.4
NC_012125:326909:332076332076332333258Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1994.4
NC_011294:311796:317103317103317360258Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-1992.8
NC_011205:329155:341189341189341446258Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-1992.8
NC_016831:2667561:268641626864162686586171Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-1682
NC_013421:385930:393088393088393399312Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF1813 HSP20-like protein2e-0961.2
NC_016845:4498097:452407745240774524370294Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-0650.4
NC_011083:338910:348325348325348498174Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein4e-0650.1