Pre_GI: BLASTP Hits

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Query: NC_011083:1993672:2000823 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 2000823, End: 2000954, Length: 132

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:1391971:141455814145581414689132Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-1890.1
NC_016832:1090274:110536111053611105492132Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein8e-1889
NC_016856:1957263:196442919644291964551123Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein2e-1684.3
NC_011094:1923870:193102719310271931158132Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-1581.6
NC_011149:1236689:124748512474851247616132Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein5e-1269.7
NC_011080:1944226:195136819513681951514147Salmonella enterica subsp. enterica serovar Newport str. SL254,hypothetical protein2e-1064.7