Pre_GI: BLASTP Hits

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Query: NC_010572:6293417:6297288 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 6297288, End: 6298262, Length: 975

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:1922930:193981119398111940785975Streptomyces fulvissimus DSM 40593, complete genomeCarbohydrate kinase0645
NC_015953:1756493:177040417704041771378975Streptomyces sp. SirexAA-E chromosome, complete genomeadenosine kinase9e-174609
NC_018750:2005229:202258020225802023554975Streptomyces venezuelae ATCC 10712, complete genomeputative Adenosine kinase1e-168592
NC_003888:2305901:2321282232128223222981017Streptomyces coelicolor A3(2), complete genomekinase1e-167589
NC_014210:3763940:377171937717193772690972Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Adenosine kinase1e-119429
NC_013159:2913927:291747829174782918443966Saccharomonospora viridis DSM 43017, complete genomesugar kinase, ribokinase7e-114410
NC_013947:4413382:443611544361154437098984Stackebrandtia nassauensis DSM 44728 chromosome, complete genomePfkB domain-containing protein2e-103375
NC_003902:4111283:413348041334804134412933Xanthomonas campestris pv. campestris str. ATCC 33913, completesugar kinase1e-48193
NC_012968:507988:524163524163525119957Methylotenera mobilis JLW8, complete genomePfkB domain protein5e-46185
NC_007484:2893878:289701728970172897949933Nitrosococcus oceani ATCC 19707, complete genomeCarbohydrate kinase, PfkB1e-45184
NC_015222:1843093:185912118591211860056936Nitrosomonas sp. AL212 chromosome, complete genomeAdenosine kinase2e-42172
NC_014153:436082:436082436082437026945Thiomonas intermedia K12 chromosome, complete genomePfkB domain protein3e-41169
NC_006513:881120:881120881120882055936Azoarcus sp. EbN1, complete genomecarbohydrate kinase3e-41169
NC_009465:938378:966414966414967355942Candidatus Vesicomyosocius okutanii HA, complete genomecarbohydrate kinase9e-40164
NC_010645:3239420:325865532586553259596942Bordetella avium 197N, complete genomeadenosine kinase5e-36151
NC_014122:842560:853126853126854025900Methanocaldococcus infernus ME chromosome, complete genomePfkB domain protein1e-22107
NC_013887:1601730:162722016272201628122903Methanocaldococcus sp. FS406-22 chromosome, complete genomePfkB domain protein3e-21102
NC_009515:1409912:140991214099121410826915Methanobrevibacter smithii ATCC 35061, complete genomeribokinase family sugar kinase2e-1996.7
NC_010723:3499291:350653935065393507489951Clostridium botulinum E3 str. Alaska E43, complete genomekinase, PfkB family6e-1375.1
NC_014363:1396912:141793014179301418916987Olsenella uli DSM 7084 chromosome, complete genomePfkB domain protein8e-1374.7
NC_015574:114426:130631130631131545915Methanobacterium sp. SWAN-1 chromosome, complete genomePfkB domain-containing protein2e-1273.6
NC_011832:1122268:112260311226031123487885Candidatus Methanosphaerula palustris E1-9c, complete genomePfkB domain protein5e-1272
NC_000854:1:890889089840933Aeropyrum pernix K1, complete genomeATP-dependent 6-phosphofructokinase5e-1168.9
NC_008942:915871:929615929615930511897Methanocorpusculum labreanum Z, complete genomePhosphoribosylanthranilate isomerase2e-1067
NC_014961:335808:347856347856348779924Desulfurococcus mucosus DSM 2162 chromosome, complete genome6-phosphofructokinase5e-0962.4
NC_010184:661226:668277668277669173897Bacillus weihenstephanensis KBAB4, complete genomeribokinase4e-0755.8
NC_004722:650950:656644656644657540897Bacillus cereus ATCC 14579, complete genomeRibokinase6e-0755.1
NC_011772:647778:654988654988655884897Bacillus cereus G9842, complete genomeribokinase6e-0755.1
NC_011725:681387:687081687081687977897Bacillus cereus B4264 chromosome, complete genomeribokinase2e-0653.5
NC_017208:671128:679158679158680054897Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeribokinase2e-0653.5