Pre_GI: BLASTP Hits

Some Help

Query: NC_010501:4989455:5006142 Pseudomonas putida W619, complete genome

Start: 5006142, End: 5007563, Length: 1422

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007973:2773427:2784562278456227859381377Ralstonia metallidurans CH34 chromosome 1, complete sequencephage integrase5e-130464
NC_014733:1073540:1079385107938510807071323Methylovorus sp. MP688 chromosome, complete genomeintegrase family protein1e-107390
NC_010511:5424004:5437251543725154387231473Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein2e-70266
NC_014010:1392536:1425533142553314266781146Candidatus Puniceispirillum marinum IMCC1322 chromosome, completephage integrase6e-62238
NC_014034:3111981:3126440312644031278311392Rhodobacter capsulatus SB1003 chromosome, complete genomephage integrase2e-55217
NC_020911:4465500:4473465447346544747601296Octadecabacter antarcticus 307, complete genomeDNA integration/recombination/inversion protein5e-28125
NC_011894:6888562:6908936690893669100121077Methylobacterium nodulans ORS 2060, complete genomeintegrase family protein4e-23109
NC_014217:4597426:4610251461025146115551305Starkeya novella DSM 506 chromosome, complete genomeintegrase family protein7e-21102
NC_017322:1360764:1366668136666813680021335Sinorhizobium meliloti BL225C chromosome, complete genomeintegrase family protein3e-20100
NC_020911:3475096:3482882348288234841501269Octadecabacter antarcticus 307, complete genomeputative integrase6e-2099
NC_014034:1330843:1343470134347013447351266Rhodobacter capsulatus SB1003 chromosome, complete genome7e-2099
NC_003911:1078949:1098451109845110995391089Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family1e-1998.2
NC_009667:1371924:1386666138666613879821317Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencehypothetical protein2e-1997.8
NC_017325:1897500:1914476191447619158101335Sinorhizobium meliloti SM11 chromosome, complete genomephage integrase2e-1894.4
NC_007802:3575739:3578679357867935799471269Jannaschia sp. CCS1, complete genomephage integrase7e-1892.4
NC_007643:3799425:3824154382415438258541701Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase3e-1790.5
NC_007802:1991211:1997294199729419985621269Jannaschia sp. CCS1, complete genomephage integrase2e-1790.5
NC_017323:1644000:1685300168530016866371338Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceintegrase family protein9e-1582
NC_014541:1231021:1236294123629412375351242Ferrimonas balearica DSM 9799 chromosome, complete genomeintegrase family protein3e-1273.6
NC_010682:460523:4937344937344950531320Ralstonia pickettii 12J chromosome 1, complete sequenceintegrase family protein3e-1273.6
NC_013521:3204250:3209439320943932105511113Sanguibacter keddieii DSM 10542, complete genomesite-specific recombinase XerD2e-1170.9
NC_014153:2044500:2065464206546420667681305Thiomonas intermedia K12 chromosome, complete genomeintegrase family protein4e-1169.7
NC_011146:1998981:2013194201319420144981305Geobacter bemidjiensis Bem, complete genomeintegrase family protein9e-1168.9
NC_014973:3452100:3471071347107134723601290Geobacter sp. M18 chromosome, complete genomeintegrase family protein1e-1068.6
NC_015740:2614317:263366526336652634567903Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein2e-1067.4
NC_011146:3426500:3474592347459234759021311Geobacter bemidjiensis Bem, complete genomeintegrase family protein3e-1067
NC_011662:1160887:1170392117039211715971206Thauera sp. MZ1T, complete genomehypothetical protein3e-1067
NC_012988:3288253:3306692330669233079961305Methylobacterium extorquens DM4, complete genomeintegrase4e-1066.6
NC_012988:670101:6731236731236744451323Methylobacterium extorquens DM4, complete genomeintegrase6e-1065.9
NC_006350:845513:8574748574748588321359Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative phage-related integrase4e-0963.5
NC_009076:779407:7927997927997941571359Burkholderia pseudomallei 1106a chromosome I, complete sequencesite-specific recombinase, phage integrase family4e-0963.5
NC_020911:1549065:1555207155520715567301524Octadecabacter antarcticus 307, complete genomeputative integrase3e-0963.5
NC_007434:1001514:1016158101615810173961239Burkholderia pseudomallei 1710b chromosome I, complete sequenceputative phage-related integrase5e-0962.8
NC_009434:608765:6778376778376802902454Pseudomonas stutzeri A1501, complete genomehypothetical protein8e-0962.4
NC_010501:3987615:3992949399294939942741326Pseudomonas putida W619, complete genomeintegrase family protein9e-0962
NC_008027:1847040:1862344186234418636361293Pseudomonas entomophila L48, complete genomeintegrase9e-0962
NC_009348:2034500:2041208204120820424731266Aeromonas salmonicida subsp. salmonicida A449, complete genomephage integrase family site specific recombinase2e-0860.8
NC_020911:4465500:448400344840034484932930Octadecabacter antarcticus 307, complete genomeputative DNA integration/recombination/inversion protein2e-0860.8
NC_003911:1265972:1277271127727112788601590Silicibacter pomeroyi DSS-3, complete genomesite-specific recombinase, phage integrase family3e-0860.5
NC_015381:3789661:3796625379662537982231599Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative phage-related integrase5e-0859.7
NC_010511:1641416:1641416164141616429631548Methylobacterium sp. 4-46 chromosome, complete genomeintegrase domain-containing protein6e-0859.3
NC_014307:1619000:1623749162374916253741626Ralstonia solanacearum CFBP2957 chromosome, complete genomephage integrase9e-0858.5
NC_013456:2528284:2536921253692125386211701Vibrio sp. Ex25 chromosome 1, complete genomeintegrase1e-0758.5
NC_010511:915313:9290119290119306001590Methylobacterium sp. 4-46 chromosome, complete genomeintegrase family protein1e-0758.2
NC_009439:4661102:4664986466498646666801695Pseudomonas mendocina ymp, complete genomehypothetical protein2e-0757.4
NC_007516:1283210:1293375129337512945771203Synechococcus sp. CC9605, complete genomeSite-specific recombinase XerD-like2e-0757.4
NC_007643:791500:7959047959047970641161Rhodospirillum rubrum ATCC 11170, complete genomePhage integrase2e-0757.4
NC_013173:953633:9706779706779727402064Desulfomicrobium baculatum DSM 4028, complete genomeintegrase family protein3e-0757
NC_009720:216589:2196452196452212971653Xanthobacter autotrophicus Py2, complete genomeintegrase family protein6e-0756.2
NC_008782:1863853:1871054187105418726701617Acidovorax sp. JS42, complete genomephage integrase family protein6e-0755.8
NC_011000:1023800:1035090103509010364601371Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative phage-related integrase7e-0755.8
NC_010084:695817:7080887080887094581371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein7e-0755.8
NC_009256:3056000:3062577306257730639471371Burkholderia vietnamiensis G4 chromosome 1, complete sequencephage integrase family protein7e-0755.8
NC_010804:2808676:2815315281531528166851371Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase / tyrosine recombinase7e-0755.8
NC_014844:2828370:2841263284126328429511689Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein1e-0655.1
NC_012918:1697860:1721959172195917229631005Geobacter sp. M21 chromosome, complete genomeintegrase family protein1e-0654.7
NC_020409:584000:5846785846785863511674Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative Phage integrase2e-0654.7
NC_012660:1579204:1604792160479216062341443Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage integrase3e-0653.5
NC_015576:808926:8197348197348209031170Mycobacterium sp. JDM601 chromosome, complete genomeprophage integrase3e-0653.5
NC_004603:1115134:1121252112125211223881137Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein3e-0653.5
NC_015514:3508022:3525391352539135265331143Cellulomonas fimi ATCC 484 chromosome, complete genomeintegrase family protein3e-0653.5
NC_010338:1394550:1401072140107214028381767Caulobacter sp. K31, complete genomehypothetical protein7e-0652.4