Pre_GI: BLASTP Hits

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Query: NC_010501:3671517:3690878 Pseudomonas putida W619, complete genome

Start: 3690878, End: 3692047, Length: 1170

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011000:2831183:284490528449052845858954Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein3e-21102
NC_020302:85821:134949134949135863915Corynebacterium halotolerans YIM 70093 = DSM 44683, completetranscriptional regulator, AraC family protein2e-20100
NC_003888:5443832:5452526545252654536231098Streptomyces coelicolor A3(2), complete genomearaC family regulatory protein2e-20100
NC_013595:8603188:8612964861296486139921029Streptosporangium roseum DSM 43021, complete genomeAraC family transcriptional regulator6e-2099
NC_014931:3642779:364471236447123645674963Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, AraC family3e-1996.3
NC_011881:89705:1018661018661028671002Arthrobacter chlorophenolicus A6 plasmid pACHL02, completetranscriptional regulator, AraC family4e-1995.9
NC_009921:8147947:815632781563278157223897Frankia sp. EAN1pec, complete genometranscriptional regulator, AraC family2e-1893.6
NC_003155:883500:891284891284892279996Streptomyces avermitilis MA-4680, complete genomeAraC-family transcriptional regulator5e-1892.4
NC_007802:3807500:3819336381933638203491014Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family9e-1891.7
NC_013595:5282207:5286943528694352880041062Streptosporangium roseum DSM 43021, complete genomeAraC-type DNA-binding domain-containing protein- like protein1e-1791.7
NC_016514:2079975:210364421036442104552909Enterobacter cloacae EcWSU1 chromosome, complete genometranscriptional activator feaR8e-1788.2
NC_019940:3089884:310140831014083102406999Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator6e-1685.5
NC_015259:734795:765291765291766247957Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAraC-family transcriptional regulator8e-1685.1
NC_015953:4746983:4763337476333747643651029Streptomyces sp. SirexAA-E chromosome, complete genomeHelix-turn-helix, AraC domain-containing protein3e-1583.6
NC_015723:430165:4573224573224596852364Cupriavidus necator N-1 chromosome 2, complete sequenceformamidase FmdR3e-1583.2
NC_015136:1101725:112277511227751123755981Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator4e-1582.8
NC_011757:517000:530059530059530844786Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family7e-1582
NC_012982:2730000:274518827451882746102915Hirschia baltica ATCC 49814, complete genometranscriptional regulator, AraC family2e-1480.5
NC_014323:992978:1023696102369610247481053Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein2e-1480.1
NC_015138:201323:201323201323202261939Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeAraC family transcriptional regulator2e-1377.4
NC_015410:3093465:315460531546053155408804Pseudomonas mendocina NK-01 chromosome, complete genomeDNA-binding transcriptional activator FeaR2e-1377.4
NC_012982:2730000:2747571274757127498862316Hirschia baltica ATCC 49814, complete genometranscriptional regulator, AraC family with acetamidase/formamidase activity5e-1375.9
NC_015259:485015:557853557853558812960Polymorphum gilvum SL003B-26A1 chromosome, complete genomeAraC-family transcriptional regulator5e-1375.9
NC_010623:1961685:1973975197397519750391065Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family5e-1375.9
NC_007511:3512100:3512100351210035131341035Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family6e-1375.5
NC_012791:2233098:225195022519502252867918Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, AraC family6e-1272
NC_008268:7485710:749915374991537500100948Rhodococcus sp. RHA1, complete genometranscriptional regulator1e-1171.6
NC_017249:3267500:3286552328655232875651014Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-1169.7
NC_014153:2077647:209508320950832096024942Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, AraC family4e-1169.3
NC_012721:109500:1187871187871198211035Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, AraC family protein5e-1169.3
NC_015723:1486000:1489297148929714903551059Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator3e-1066.2
NC_007802:4071006:407474240747424075740999Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family4e-1066.2
NC_013446:3209000:3211048321104832120641017Comamonas testosteroni CNB-2, complete genometranscriptional regulator, AraC family2e-0964.3
NC_010505:1581429:158326015832601584234975Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, AraC family4e-0962.8
NC_018870:354164:3720013720013733231323Thermacetogenium phaeum DSM 12270 chromosome, complete genometranscriptional regulator, AraC family6e-0962.4
NC_013406:4478000:448353744835374484400864Paenibacillus sp. Y412MC10 chromosome, complete genomeAraC family transcriptional regulator7e-0962
NC_006349:1630514:1646532164653216475931062Burkholderia mallei ATCC 23344 chromosome 2, complete sequencetranscriptional regulator, araC family9e-0961.6
NC_008835:2133696:213845321384532139445993Burkholderia mallei NCTC 10229 chromosome I, complete sequencetranscriptional regulator, araC family1e-0861.2
NC_009079:705931:710682710682711674993Burkholderia mallei NCTC 10247 chromosome I, complete sequencetranscriptional regulator, araC family1e-0861.2
NC_017955:3545626:356240935624093563371963Modestobacter marinus, complete genomeAraC family transcriptional regulator2e-0860.5
NC_012914:5446366:5444810544481054463691560Paenibacillus sp. JDR-2, complete genometwo component transcriptional regulator, AraC family2e-0860.5
NC_013205:2332174:234776623477662348590825Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, AraC family3e-0860.1
NC_015376:903939:9248399248399258911053Burkholderia gladioli BSR3 chromosome chromosome 2, completeAraC family transcriptional regulator4e-0859.3
NC_015259:485015:5491645491645502431080Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, AraC family7e-0858.9
NC_013929:3600343:361090536109053611753849Streptomyces scabiei 87.22 chromosome, complete genomecellobiose-dependent regulator TxtR9e-0858.5
NC_014323:992978:101159110115911012514924Herbaspirillum seropedicae SmR1 chromosome, complete genomenitrilase regulator protein1e-0758.2
NC_014364:3238374:323926032392603239499240Spirochaeta smaragdinae DSM 11293 chromosome, complete genome1e-0757.8
NC_016114:7282882:7291086729108672921051020Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeAraC family transcriptional regulator1e-0757.8
NC_007677:71532:8496684966873742409Salinibacter ruber DSM 13855, complete genomesensor histidine kinase with multiple PAS and a response regulator receiver domain2e-0757
NC_015065:162317:202038202038202922885Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequencetranscriptional regulator, AraC family2e-0757
NC_018868:4010615:4031857403185740329901134Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeAraC family transcriptional regulator3e-0756.6
NC_014618:2788533:279390727939072794872966Enterobacter cloacae SCF1 chromosome, complete genomeAraC family transcriptional regulator6e-0755.8
NC_016935:4117485:418696441869644187827864Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator6e-0652.4
NC_015690:4361000:442089344208934421756864Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator6e-0652.4