Pre_GI Gene

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Host: NC_017249 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017249:3267500 Bradyrhizobium japonicum USDA 6, complete genome

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3268227326830276tRNA-IleQuickGO ontology
32686113269294684hypothetical protein
32698333270213381hypothetical proteinBLASTP
32711383271302165hypothetical proteinBLASTP
32715533271813261hypothetical proteinBLASTP
32718753272258384hypothetical proteinBLASTP
32722583272569312hypothetical proteinBLASTP
32733053273502198hypothetical proteinBLASTP
32740153274263249hypothetical proteinBLASTP
327441132756041194hypothetical proteinBLASTP
32757333276563831hypothetical proteinBLASTP
327771432795011788hypothetical proteinBLASTP
32800763280252177hypothetical protein
32803753280566192hypothetical protein
32809473281141195hypothetical protein
32811563281353198hypothetical proteinBLASTP
32815913282094504hypothetical proteinBLASTP
32829373283191255hypothetical protein
32830993284052954hypothetical proteinBLASTP
328395832855651608hypothetical proteinBLASTP
32855113285924414hypothetical proteinBLASTP
32860373286381345hypothetical protein
328655232875651014hypothetical proteinBLASTP
32887283289522795hypothetical proteinBLASTP
32897733290591819hypothetical protein