Pre_GI: BLASTP Hits

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Query: NC_010408:79855:88265 Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1,

Start: 88265, End: 89125, Length: 861

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causative agent of bacterial ring rot. Isolated from infected potato. This organism was first described and classified in 1914 as "Bacterium sepedonicus" and is considered a major plant pathogen. It is a phytopathogenic actinomycete that causes wilt and tuber rot in potato, which is a plant vascular disease with very high bacterial titers. Pathogenicity is believed to be associated with the presence of two plasmids, pCSL1 and pCSL2. This species is subdivided into five subspecies: michiganensis, sepedonicus, nebraskensis, tesselarius and insidiosus each of which infects specific hosts: tomato, potato, corn, wheat and alfalfa, respectively. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009480:31412:707857078571645861Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative extracellular serine protease, family S1 (chymotrypsin)7e-149526
NC_010407:3132683:3145967314596731469891023Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative pat-1-like protein9e-32137
NC_009479:34001:534655346554298834Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmidputative extracellular serine protease7e-25114
NC_010399:13222:202782027821147870Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completepat1 protein1e-24114
NC_009480:31412:487344873449567834Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative extracellular serine protease, family S1A8e-24110
NC_009479:34001:553715537156213843Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmidhypothetical protein2e-22106
NC_010407:3132683:314414831441483144990843Clavibacter michiganensis subsp. sepedonicus chromosome, completeputative pat-1-like protein5e-21101
NC_009479:34001:520865208652940855Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmidhypothetical protein5e-1995.1
NC_006087:2470708:248040724804072481348942Leifsonia xyli subsp. xyli str. CTCB07, complete genomepat1 protein5e-1995.1
NC_009480:31412:747797477975633855Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative extracellular serine protease, family S1 (chymotrypsin)5e-1891.7
NC_010399:13222:296322963230261630Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completepat1 protein9e-1787.4
NC_008752:3595516:361065836106583611569912Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein3e-1582.8
NC_007508:5093365:510179751017975102339543Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative secreted protein2e-1273.6
NC_006087:1334500:134250513425051342879375Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-1066.2