Pre_GI: BLASTP Hits

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Query: NC_010168:1373337:1392982 Renibacterium salmoninarum ATCC 33209 chromosome, complete genome

Start: 1392982, End: 1397862, Length: 4881

Host Lineage: Renibacterium salmoninarum; Renibacterium; Micrococcaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This bacterial pathogen is the causal agent of bacterial kidney disease (BKD) of salmonid fish. This disease is a significant threat to the healthy and sustainable production of salmon for consumption and species conservation efforts in the USA. The development of treatments are further complicated as the organism is vertically transmitted from infected females to their eggs, is difficult to culture in vitro, and is a facultative intracellular pathogen. The completion of the genome sequence of Renibacterium salmoninarum will be a benefit to the scientific community at many levels and will be of immediate use to researchers and fish health practitioners dealing with BKD in farmed fish as well as captive broodstocks of endangered species-listed populations. For example, genome data will serve as a foundation for identification of virulence factors, DNA vaccine gene candidates, and improved diagnostic tests.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015145:2693749:2731765273176527366184854Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeglutamate dehydrogenase (NAD)02241
NC_014550:2355500:2371385237138523761784794Arthrobacter arilaitensis Re117, complete genomeNAD-specific glutamate dehydrogenase01710
NC_019673:1384795:1384795138479513897624968Saccharothrix espanaensis DSM 44229 complete genomeNAD-specific glutamate dehydrogenase01278
NC_008148:2498000:2542337254233725471934857Rubrobacter xylanophilus DSM 9941, complete genomeNAD-glutamate dehydrogenase01245
NC_014311:2385666:2404620240462024095844965Ralstonia solanacearum PSI07 chromosome, complete genomeNAD-glutamate dehydrogenase (gdhB)01244
NC_014118:1331164:1331164133116413360024839Burkholderia sp. CCGE1002 chromosome chromosome 2, completeNAD-glutamate dehydrogenase01238
NC_013757:2706835:2706835270683527116794845Geodermatophilus obscurus DSM 43160, complete genomeNAD-glutamate dehydrogenase01237
NC_007908:1600244:1622497162249716272694773Rhodoferax ferrireducens T118, complete genomeNAD-glutamate dehydrogenase01178
NC_016745:2229271:2256453225645322612884836Oceanimonas sp. GK1 chromosome, complete genomeNAD-glutamate dehydrogenase01112
NC_007492:3655545:3681251368125136861374887Pseudomonas fluorescens PfO-1, complete genomeNAD-glutamate dehydrogenase01091
NC_015312:6357469:6352974635297463574824509Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeNAD-glutamate dehydrogenase01067
NC_016944:1594608:1594608159460815994494842Vibrio cholerae IEC224 chromosome I, complete sequenceNAD-specific glutamate dehydrogenase01062
NC_010511:4258000:4290282429028242951234842Methylobacterium sp. 4-46 chromosome, complete genomeNAD-glutamate dehydrogenase01028
NC_016887:221788:2353782353782387703393Nocardia cyriacigeorgica GUH-2, complete genomeputative NAD-specific glutamate dehydrogenase0898
NC_014006:924417:9244179244179290844668Sphingobium japonicum UT26S chromosome 1, complete genomeNAD-specific glutamate dehydrogenase0897
NC_015594:214500:2315972315972362614665Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeNAD-glutamate dehydrogenase0875
NC_002978:200878:2025332025332072574725Wolbachia endosymbiont of Drosophila melanogaster, complete genomehypothetical protein0863
NC_012416:205925:2113742113742161074734Wolbachia sp. wRi, complete genomehypothetical protein0860
NC_012026:415447:4301844301844347014518Anaplasma marginale str. Florida, complete genomeNAD-specific glutamate dehydrogenase0848
NC_016913:83988:1010701010701058244755Rickettsia rickettsii str. Brazil chromosome, complete genomeNAD-specific glutamate dehydrogenase0831
NC_016050:1088223:1088223108822310929744752Rickettsia japonica YH, complete genomeNAD-specific glutamate dehydrogenase0827
NC_017042:1206000:1223332122333212280864755Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeNAD-specific glutamate dehydrogenase0824
NC_013939:1927424:1944105194410519487904686Deferribacter desulfuricans SSM1, complete genomeNAD-glutamate dehydrogenase0780
NC_014315:3207684:3214626321462632194104785Nitrosococcus watsoni C-113 chromosome, complete genomeNAD-glutamate dehydrogenase0742
NC_007484:3358000:3364313336431333690974785Nitrosococcus oceani ATCC 19707, complete genomeNAD-glutamate dehydrogenase0732
NC_008278:132000:1489721489721523013330Frankia alni ACN14a, complete genomeputative NAD-specific glutamate dehydrogenase (NAD-GDH)8e-174612
NC_009483:1116385:1131916113191611348762961Geobacter uraniireducens Rf4 chromosome, complete genomeGlu/Leu/Phe/Val dehydrogenase8e-1687.4
NC_012918:1697860:1698680169868017016402961Geobacter sp. M21 chromosome, complete genomeglutamate dehydrogenase8e-1584
NC_014973:3151701:3166746316674631697062961Geobacter sp. M18 chromosome, complete genomeglutamate dehydrogenase8e-1377.4