Pre_GI: BLASTP Hits

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Query: NC_010102:2762304:2774583 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2774583, End: 2775080, Length: 498

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:311796:321747321747322256510Salmonella enterica subsp. enterica serovar Enteritidis strlipoprotein1e-54212
NC_011094:334267:343169343169343663495Salmonella enterica subsp. enterica serovar Schwarzengrund strspora coat assembly protein SafA1e-49195
NC_012125:326909:336721336721337233513Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane protein4e-40163
NC_006905:326517:336851336851337363513Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane protein2e-39161
NC_016860:332087:342222342222342722501Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein7e-39159
NC_003197:332086:342209342209342721513Salmonella typhimurium LT2, complete genomeputative outer membrane protein6e-39159
NC_016810:329849:341687341687342199513Salmonella enterica subsp. enterica serovar Typhimurium stratypical fimbria lipoprotein6e-39159
NC_016856:332771:342894342894343406513Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein6e-39159
NC_016857:329849:341687341687342199513Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein6e-39159
NC_016863:332060:342183342183342695513Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein5e-39159
NC_003198:331314:341669341669342163495Salmonella enterica subsp. enterica serovar Typhi str. CT18,probable lipoprotein3e-23107
NC_006511:2540500:256367225636722564166495Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCprobable lipoprotein2e-22105
NC_003198:331314:342296342296342794499Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-0652.8