Pre_GI: BLASTP Hits

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Query: NC_010102:1979742:2000513 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2000513, End: 2000908, Length: 396

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:2646792:266773926677392668134396Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein7e-70261
NC_011147:1763681:178596917859691786364396Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein7e-70261
NC_006511:1770000:179078617907861791181396Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative secreted protein7e-70261
NC_009436:1679265:169295016929501693345396Enterobacter sp. 638, complete genomehypothetical protein9e-46181
NC_020063:2785652:279057927905792790980402Enterobacteriaceae bacterium strain FGI 57, complete genomehypothetical protein2e-44177
NC_020064:2299950:231746823174682317875408Serratia marcescens FGI94, complete genomehypothetical protein2e-2097.8
NC_008687:256692:268564268564268971408Paracoccus denitrificans PD1222 chromosome 2, complete sequenceprotein of unknown function DUF13111e-1685.1
NC_010515:1428664:143418614341861434602417Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceprotein of unknown function DUF13112e-1478.2
NC_016835:1:182511825118622372Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,hypothetical protein4e-0856.6
NC_004578:5916711:592807159280715928466396Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-0755.5
NC_004578:5916711:593202959320295932424396Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-0755.1
NC_004757:2657490:266802326680232668475453Nitrosomonas europaea ATCC 19718, complete genomeputative periplasmic protein1e-0652