Pre_GI: BLASTP Hits

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Query: NC_010102:1137247:1144551 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1144551, End: 1144733, Length: 183

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1897611:190459119045911904773183Salmonella enterica subsp. enterica serovar Paratyphi C strainGifsy-1 prophage VtaP2e-28124
NC_011147:1057259:106444610644461065432987Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-27120
NC_011080:1166951:117451911745191175157639Salmonella enterica subsp. enterica serovar Newport str. SL254,phage tail assembly protein2e-23107
NC_003197:2720726:273333727333372733915579Salmonella typhimurium LT2, complete genomephage tail assembly-like protein5e-0650.1
NC_016810:2719779:273102427310242731602579Salmonella enterica subsp. enterica serovar Typhimurium strDNA Binding protein5e-0650.1
NC_016856:2773995:278486627848662785444579Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sphage tail assembly-like protein5e-0650.1
NC_016857:2719779:273102427310242731602579Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage tail assembly-like protein5e-0650.1
NC_016860:2716152:272874527287452729323579Salmonella enterica subsp. enterica serovar Typhimurium strphage tail assembly protein5e-0650.1
NC_016863:2721826:273307127330712733649579Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1phage tail assembly-like protein5e-0650.1
NC_017046:2717810:273040327304032730981579Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA Binding protein5e-0650.1
NC_011080:2722492:273336927333692733947579Salmonella enterica subsp. enterica serovar Newport str. SL254,phage tail assembly protein5e-0650.1