Pre_GI: BLASTP Hits

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Query: NC_010067:3310336:3318289 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 3318289, End: 3318570, Length: 282

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:4405301:443615444361544436525372Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein4e-46182
NC_007613:4119771:413447441344744134824351Shigella boydii Sb227, complete genomehypothetical protein1e-41167
NC_010658:4257310:427311142731114273392282Shigella boydii CDC 3083-94, complete genomehypothetical protein3e-41166
NC_020181:3585898:360778036077803608001222Enterobacter aerogenes EA1509E, complete genomeYjcB protein3e-26117
NC_020064:2299950:231791223179122318193282Serratia marcescens FGI94, complete genomehypothetical protein1e-1582