Pre_GI: BLASTP Hits

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Query: NC_010001:2176394:2195067 Clostridium phytofermentans ISDg, complete genome

Start: 2195067, End: 2196020, Length: 954

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008593:1917118:194008919400891941003915Clostridium novyi NT, complete genomeanaerobic sulfite reductase subunit C1e-83309
NC_015425:2144639:216585321658532166767915Clostridium botulinum BKT015925 chromosome, complete genomeanaerobic sulfite reductase subunit C3e-81302
NC_009012:2953638:300970530097053010577873Clostridium thermocellum ATCC 27405, complete genomenitrite and sulphite reductase 4Fe-4S region1e-46186
NC_011832:1148859:116995011699501170816867Candidatus Methanosphaerula palustris E1-9c, complete genomenitrite and sulphite reductase 4Fe-4S region4e-46185
NC_013410:155236:168481168481169341861Fibrobacter succinogenes subsp. succinogenes S85 chromosome,nitrite and sulfite reductase 4Fe-4S region2e-43176
NC_015636:468500:4691744691744710541881Methanothermococcus okinawensis IH1 chromosome, complete genomecoenzyme F420 hydrogenase2e-34146
NC_013887:1383127:1390223139022313920881866Methanocaldococcus sp. FS406-22 chromosome, complete genomenitrite and sulphite reductase 4Fe-4S region1e-31137
NC_009635:800000:8010868010868029421857Methanococcus aeolicus Nankai-3 chromosome, complete genomenitrite and sulfite reductase 4Fe-4S region7e-29127
NC_011830:923424:9601249601249611821059Desulfitobacterium hafniense DCB-2, complete genomenitrite and sulphite reductase 4Fe-4S region3e-27122
NC_007907:5056036:506100450610045061696693Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-27122
NC_013156:728397:749616749616750431816Methanocaldococcus fervens AG86, complete genomenitrite and sulphite reductase 4Fe-4S region2e-24112
NC_000909:467607:487102487102487929828Methanocaldococcus jannaschii DSM 2661, complete genomenitrite reductase (nirA) isolog7e-24111
NC_015636:41968:574895748958298810Methanothermococcus okinawensis IH1 chromosome, complete genomenitrite and sulfite reductase 4Fe-4S region7e-23108
NC_007644:1638083:1666191166619116672131023Moorella thermoacetica ATCC 39073, complete genomeHydrogensulfite reductase1e-1894
NC_016885:809000:8426368426368437691134Pyrobaculum oguniense TE7 chromosome, complete genomesulfite reductase, dissimilatory-type beta subunit3e-1892.8
NC_009376:794562:8054038054038065361134Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomesulfite reductase, dissimilatory-type beta subunit1e-1790.5
NC_014393:1221000:122684512268451227795951Clostridium cellulovorans 743B chromosome, complete genomesulfite reductase, subunit C2e-1789.7
NC_016070:371185:3865183865183876331116Thermoproteus tenax Kra 1, complete genomesulfite reductase, dissimilatory-type subunit beta3e-1789.7
NC_016885:809000:8591648591648603211158Pyrobaculum oguniense TE7 chromosome, complete genomesulfite reductase, dissimilatory-type beta subunit3e-1789.4
NC_003364:1528762:1532817153281715339651149Pyrobaculum aerophilum str. IM2, complete genomesulfite reductase beta subunit3e-1789.4
NC_016070:371185:3827433827433839001158Thermoproteus tenax Kra 1, complete genomesulfite reductase, dissimilatory-type subunit beta5e-1788.6
NC_008593:1917118:192986919298691930819951Clostridium novyi NT, complete genomeanaerobic sulfite reductase subunit C2e-1686.7
NC_003364:1528762:1547259154725915483741116Pyrobaculum aerophilum str. IM2, complete genomesulfite reductase beta subunit6e-1685.1
NC_019978:1244000:1264703126470312657071005Halobacteroides halobius DSM 5150, complete genomesulfite reductase, subunit C1e-1584.3
NC_016070:371185:3838973838973851141218Thermoproteus tenax Kra 1, complete genomesulfite reductase, dissimilatory-type subunit alpha2e-1583.2
NC_013517:599949:603817603817604785969Sebaldella termitidis ATCC 33386, complete genomesulfite reductase, subunit C5e-1582
NC_015499:1403447:1414085141408514152751191Thermodesulfobium narugense DSM 14796 chromosome, complete genomesulfite reductase, dissimilatory-type alpha subunit8e-1581.3
NC_015589:366296:3862983862983873621065Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesulfite reductase dissimilatory-type subunit beta4e-1479
NC_016070:371185:3852863852863865211236Thermoproteus tenax Kra 1, complete genomesulfite reductase, dissimilatory-type subunit alpha5e-1478.6
NC_015499:1403447:1413027141302714140851059Thermodesulfobium narugense DSM 14796 chromosome, complete genomesulfite reductase, dissimilatory-type beta subunit7e-1478.2
NC_003364:1528762:1533962153396215352091248Pyrobaculum aerophilum str. IM2, complete genomesulfite reductase alpha subunit2e-1377
NC_003364:1528762:1546018154601815472621245Pyrobaculum aerophilum str. IM2, complete genomesulfite reductase alpha subunit4e-1375.5
NC_010525:285805:3005033005033016391137Thermoproteus neutrophilus V24Sta, complete genomesulfite reductase, dissimilatory-type beta subunit1e-1273.9
NC_007644:1638083:1664993166499316660601068Moorella thermoacetica ATCC 39073, complete genomeHydrogensulfite reductase9e-1271.2
NC_015589:366296:3873963873963885921197Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesulfite reductase dissimilatory-type subunit alpha2e-1170.1
NC_013959:156991:1737391737391761832445Sideroxydans lithotrophicus ES-1 chromosome, complete genomenitrite reductase (NAD(P)H), large subunit3e-1169.3
NC_009376:794562:8041688041688054061239Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomesulfite reductase, dissimilatory-type alpha subunit4e-1065.9
NC_010525:285805:2992682992683005061239Thermoproteus neutrophilus V24Sta, complete genomesulfite reductase, dissimilatory-type alpha subunit5e-1065.5
NC_016885:809000:8603188603188615501233Pyrobaculum oguniense TE7 chromosome, complete genomesulfite reductase, dissimilatory-type alpha subunit6e-1065.1
NC_016885:809000:8414018414018426391239Pyrobaculum oguniense TE7 chromosome, complete genomesulfite reductase, dissimilatory-type alpha subunit7e-1065.1
NC_013202:418500:4193734193734211331761Halomicrobium mukohataei DSM 12286, complete genomeFerredoxin--nitrite reductase7e-1065.1
NC_006396:2625962:2652478265247826542411764Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceferredoxin-nitrite reductase8e-1064.7
NC_004605:1092476:1112013111201311145322520Vibrio parahaemolyticus RIMD 2210633 chromosome II, completenitrite reductase1e-0861.2
NC_015565:1281397:129763012976301298340711Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completenitrite and sulfite reductase 4Fe-4S region1e-0860.8
NC_014297:1:4665466564071743Halalkalicoccus jeotgali B3 chromosome, complete genomenitrite and sulphite reductase 4Fe-4S region1e-0860.8
NC_009465:813816:8272248272248282971074Candidatus Vesicomyosocius okutanii HA, complete genomeintracellular sulfur oxidation protein DsrB3e-0859.7
NC_019978:315346:327542327542328225684Halobacteroides halobius DSM 5150, complete genomeNAD(P)H-nitrite reductase4e-0859.3
NC_015064:2421034:2442971244297124447191749Acidobacterium sp. MP5ACTX9 chromosome, complete genomenitrite and sulphite reductase 4Fe-4S region8e-0858.2
NC_009465:813816:8283738283738296741302Candidatus Vesicomyosocius okutanii HA, complete genomeintracellular sulfur oxidation protein DsrA1e-0757.4
NC_013093:915248:9209829209829234862505Actinosynnema mirum DSM 43827, complete genomenitrite reductase (NAD(P)H), large subunit1e-0757.4
NC_019978:1244000:124405712440571244809753Halobacteroides halobius DSM 5150, complete genomeNAD(P)H-nitrite reductase2e-0757
NC_013859:421500:4372904372904398422553Azospirillum sp. B510 plasmid pAB510e, complete sequencenitrite reductase (NAD(P)H) large subunit2e-0757
NC_014829:259707:2656092656092681192511Bacillus cellulosilyticus DSM 2522 chromosome, complete genomenitrite reductase (NAD(P)H), large subunit2e-0756.6
NC_014323:3292082:3292082329208232946552574Herbaspirillum seropedicae SmR1 chromosome, complete genomenitrite reductase large subunit3e-0756.2
NC_013192:374000:3783873783873800961710Leptotrichia buccalis DSM 1135, complete genomenitrite and sulphite reductase 4Fe-4S region3e-0756.2
NC_016614:822715:8411418411418437052565Vibrio sp. EJY3 chromosome 2, complete sequencenitrite reductase subunit NirD4e-0755.8
NC_007404:1388049:1388049138804913893531305Thiobacillus denitrificans ATCC 25259, complete genomesulfite reductase, dissimilatory-type alpha subunit5e-0755.5
NC_021150:2315362:2334026233402623364762451Azotobacter vinelandii CA6, complete genomeAssimilatory Nitrite reductase,large subunit; NasA5e-0755.5
NC_012560:2315350:2334014233401423364642451Azotobacter vinelandii DJ, complete genomeAssimilatory Nitrite reductase,large subunit; NasA5e-0755.5
NC_016941:2395502:2407584240758424099892406Staphylococcus aureus subsp. aureus MSHR1132, complete genomenitrite reductase large subunit8e-0754.7
NC_013791:1082951:1087514108751410899372424Bacillus pseudofirmus OF4 chromosome, complete genomeassimilatory nitrite reductase [NAD(P)H] large subunit9e-0754.7
NC_013799:1012884:1020833102083310236522820Hydrogenobacter thermophilus TK-6, complete genomeassimilatory nitrite reductase1e-0654.3
NC_017161:1012874:1020823102082310236422820Hydrogenobacter thermophilus TK-6 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-0654.3
NC_007168:665284:6704656704656728762412Staphylococcus haemolyticus JCSC1435, complete genomenitrite reductase1e-0654.3
NC_015681:102000:120460120460121104645Thermodesulfatator indicus DSM 15286 chromosome, complete genomenitrite and sulfite reductase 4Fe-4S region1e-0654.3
NC_009253:2315958:231718123171812317891711Desulfotomaculum reducens MI-1 chromosome, complete genomenitrite and sulfite reductase 4Fe-4S subunit1e-0654.3
NC_017353:646195:6494676494676518722406Staphylococcus lugdunensis N920143, complete genomenitrite reductase large subunit1e-0653.9
NC_015563:5289875:5291115529111552936312517Delftia sp. Cs1-4 chromosome, complete genomenitrite reductase (NAD(P)H), large subunit2e-0653.9
NC_014210:2597000:2599033259903326015342502Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,nitrite reductase (NAD(P)H), large subunit3e-0653.1
NC_009632:2545419:2559075255907525614802406Staphylococcus aureus subsp. aureus JH1 chromosome, completenitrite reductase (NAD(P)H) large subunit3e-0652.8
NC_013450:2463271:2474546247454624769512406Staphylococcus aureus subsp. aureus ED98, complete genomenitrite reductase [NAD(P)H], large subunit3e-0652.8
NC_017343:2367177:2380883238088323832882406Staphylococcus aureus subsp. aureus ECT-R 2, complete genomenitrite reductase3e-0652.8
NC_017351:2489460:2501334250133425037392406Staphylococcus aureus subsp. aureus 11819-97 chromosome, completenitrite reductase [NAD(P)H], large subunit3e-0652.8
NC_012121:1894148:1903691190369119060962406Staphylococcus carnosus subsp. carnosus TM300, complete genomeNirB3e-0652.8
NC_002745:2446722:2457997245799724604022406Staphylococcus aureus subsp. aureus N315, complete genomenitrite reductase3e-0652.8
NC_002953:2435667:2450570245057024529752406Staphylococcus aureus subsp. aureus MSSA476, complete genomenitrite reductase large subunit3e-0652.8
NC_003923:2460130:2471404247140424738092406Staphylococcus aureus subsp. aureus MW2, complete genomenitrite reductase3e-0652.8
NC_017342:857630:8631568631568655612406Staphylococcus aureus subsp. aureus TCH60 chromosome, completenitrite reductase4e-0652.8
NC_002952:2550500:2562943256294325653482406Staphylococcus aureus subsp. aureus MRSA252, complete genomenitrite reductase large subunit4e-0652.8
NC_009464:931647:931647931647932318672Uncultured methanogenic archaeon RC-I, complete genomesulfite reductase, assimilatory4e-0652.8
NC_002951:2448000:2458510245851024609152406Staphylococcus aureus subsp. aureus COL, complete genomenitrite reductase [NAD(P)H], large subunit3e-0652.8
NC_009782:2519379:2530654253065425330592406Staphylococcus aureus subsp. aureus Mu3, complete genomenitrite reductase3e-0652.8
NC_002758:2515310:2529016252901625314212406Staphylococcus aureus subsp. aureus Mu50, complete genomenitrite reductase3e-0652.8
NC_016928:2411486:2422760242276024251652406Staphylococcus aureus subsp. aureus M013 chromosome, completeNitrite reductase large subunit3e-0652.8
NC_017338:2456000:2466865246686524692702406Staphylococcus aureus subsp. aureus JKD6159 chromosome, completenitrite reductase, large subunit3e-0652.8
NC_017337:2478877:2491044249104424934492406Staphylococcus aureus subsp. aureus ED133 chromosome, completenitrite reductase3e-0652.8
NC_007622:2399347:2410620241062024130252406Staphylococcus aureus RF122, complete genomenitrite reductase3e-0652.8
NC_007793:2510801:2522076252207625244812406Staphylococcus aureus subsp. aureus USA300, complete genomenitrite reductase [NAD(P)H], large subunit3e-0652.8
NC_010079:2510951:2522226252222625246312406Staphylococcus aureus subsp. aureus USA300_TCH1516, completenitrite reductase (NAD(P)H) large subunit3e-0652.8
NC_017347:2511783:2523058252305825254632406Staphylococcus aureus subsp. aureus T0131 chromosome, completeAssimilatory nitrite reductase [NAD(P)H], large subunit3e-0652.8
NC_017341:2544327:2555602255560225580072406Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,nitrite reductase, large subunit3e-0652.8
NC_016912:2329113:2340388234038823427932406Staphylococcus aureus subsp. aureus VC40 chromosome, completeassimilatory nitrite reductase [NAD(P)H], large subunit3e-0652.8
NC_009641:2513300:2527008252700825294132406Staphylococcus aureus subsp. aureus str. Newman chromosome,assimilatory nitrite reductase [NAD(P)H], large subunit3e-0652.8
NC_007795:2455468:2469175246917524715802406Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeassimilatory nitrite reductase [NAD(P)H], large subunit, putative3e-0652.8
NC_010694:1932126:1951478195147819556804203Erwinia tasmaniensis, complete genomeNitrite reductase [NAD(P)H] large subunit4e-0652.4
NC_010162:11812211:1183052711830527118330672541Sorangium cellulosum 'So ce 56', complete genomenitrite reductase5e-0652.4
NC_016582:8711199:8729994872999487326272634Streptomyces bingchenggensis BCW-1 chromosome, complete genomenitrite reductase (NAD(P)H) large subunit5e-0652
NC_020409:437781:494156494156494821666Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeSulfite reductase, assimilatory-type7e-0651.6