Pre_GI: BLASTP Hits

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Query: NC_009831:2045811:2056843 Shewanella sediminis HAW-EB3, complete genome

Start: 2056843, End: 2058384, Length: 1542

Host Lineage: Shewanella sediminis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella sediminis was isolated from sediment taken at a depth of 215 meters from an unexploded-ordinance-dumping site 50 nautical miles from Halifax Harbor, Canada in the Atlantic Ocean. This organism is able to degrade hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) anaerobically at 10 degrees C. RDX is a member of a family of nitramine compounds which are used in the production of explosives. Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008601:246583:2759112759112774221512Francisella tularensis subsp. novicida U112, complete genomeC4-dicarboxylate anaerobic carrier1e-100367
NC_014541:2510819:2513700251370025151571458Ferrimonas balearica DSM 9799 chromosome, complete genomeC4-dicarboxylate anaerobic carrier2e-98359
NC_004347:3028000:303755130375513038111561Shewanella oneidensis MR-1, complete genome2e-62240
NC_004347:3028000:303930130393013039783483Shewanella oneidensis MR-1, complete genome6e-59228
NC_016641:2773757:2797894279789427993121419Paenibacillus terrae HPL-003 chromosome, complete genomeC4-dicarboxylate anaerobic carrier5e-56219
NC_015389:809474:8315898315898330521464Coriobacterium glomerans PW2 chromosome, complete genomeC4-dicarboxylate anaerobic carrier6e-53208
NC_010718:2860096:2874496287449628758781383Natranaerobius thermophilus JW/NM-WN-LF, complete genomeC4-dicarboxylate anaerobic carrier4e-50199
NC_012780:430653:4306534306534320981446Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein6e-47189
NC_014364:3500041:3501368350136835027921425Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeC4-dicarboxylate anaerobic carrier1e-43177
NC_008710:900586:9140649140649154791416Borrelia turicatae 91E135, complete genomearginine/ornithine antiporter3e-43176
NC_009495:1516000:1535500153550015370351536Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeC4-dicarboxylate transporter3e-43176
NC_007168:195638:1956381956381970321395Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein4e-42172
NC_004461:205068:2170382170382186031566Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein2e-41171
NC_012691:2614603:2683425268342526848701446Tolumonas auensis DSM 9187, complete genomeC4-dicarboxylate anaerobic carrier2e-41170
NC_017986:2548720:2569814256981425712531440Pseudomonas putida ND6 chromosome, complete genomeC4-dicarboxylate anaerobic carrier5e-41169
NC_004557:2607073:2617884261788426192811398Clostridium tetani E88, complete genometransporter4e-40166
NC_014498:2127000:2143987214398721454981512Streptococcus pneumoniae 670-6B chromosome, complete genomearginine-ornithine antiporter2e-38160
NC_012466:2008000:2027031202703120285421512Streptococcus pneumoniae JJA, complete genomearginine-ornithine antiporter2e-38160
NC_011900:2107133:2127634212763421291451512Streptococcus pneumoniae ATCC 700669, complete genomeC4-dicarboxylate anaerobic carrier protein2e-38160
NC_012467:1997484:2018682201868220201931512Streptococcus pneumoniae P1031, complete genomearginine-ornithine antiporter2e-38160
NC_008533:1935500:1952608195260819541191512Streptococcus pneumoniae D39, complete genomehypothetical protein2e-38160
NC_010582:2091138:2112506211250621140171512Streptococcus pneumoniae CGSP14, complete genomehypothetical protein2e-38160
NC_003098:1925783:1945106194510619466171512Streptococcus pneumoniae R6, complete genomehypothetical protein2e-38160
NC_012468:2069238:2088265208826520897761512Streptococcus pneumoniae 70585, complete genomearginine-ornithine antiporter2e-38160
NC_016751:1979201:1980549198054919820361488Marinitoga piezophila KA3 chromosome, complete genomehypothetical protein5e-38159
NC_010673:908940:9173459173459187631419Borrelia hermsii DAH, complete genomearginine/ornithine antiporter5e-38159
NC_014614:1090000:1106312110631211078261515Clostridium sticklandii, complete genomeconserved membrane protein of unknown function1e-35151
NC_003454:865368:8826568826568841671512Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTransporter2e-30134
NC_015696:220798:2242602242602256751416Francisella sp. TX077308 chromosome, complete genomeArginine/ornithine antiporter ArcD5e-30132
NC_013515:183088:2226022226022240561455Streptobacillus moniliformis DSM 12112, complete genomeC4-dicarboxylate anaerobic carrier2e-29130
NC_008601:246583:275553275553275780228Francisella tularensis subsp. novicida U112, complete genome2e-1067.8