Pre_GI: BLASTP Hits

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Query: NC_009708:2537557:2552641 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2552641, End: 2553684, Length: 1044

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011415:2277559:2300210230021023012741065Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-85316
NC_009801:2193000:2213785221378522148491065Escherichia coli E24377A, complete genomehypothetical protein2e-85316
NC_016816:1970189:1987156198715619882201065Pantoea ananatis LMG 5342, complete genomephage replication protein O4e-43175
NC_014837:2354241:2355619235561923566831065Pantoea sp. At-9b chromosome, complete genomephage replication protein O9e-41167
NC_012121:474144:482922482922483683762Staphylococcus carnosus subsp. carnosus TM300, complete genomeconserved hypothetical protein, phage associated2e-27123
NC_014650:603500:621711621711622664954Geobacillus sp. Y4.1MC1 chromosome, complete genomeprimosome subunit DnaD3e-27122
NC_013766:679906:684835684835685749915Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein3e-26119
NC_007622:1842000:187748118774811878236756Staphylococcus aureus RF122, complete genomehypothetical phage-related protein3e-26119
NC_020164:1677452:170537017053701706185816Staphylococcus warneri SG1, complete genomehypothetical protein4e-25115
NC_007712:1893066:190209219020921902865774Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-25115
NC_017337:1107930:111676111167611117513753Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical phage-related protein1e-23110
NC_020210:2969862:2996116299611629974171302Geobacillus sp. GHH01, complete genomehypothetical protein5e-23108
NC_017208:694500:701810701810702613804Bacillus thuringiensis serovar chinensis CT-43 chromosome, completePhage replication protein1e-22107
NC_009436:2776410:281597428159742816894921Enterobacter sp. 638, complete genomehypothetical protein2e-2099.8
NC_012214:1974500:198329719832971984205909Erwinia pyrifoliae Ep1/96, complete genomesimilar to phage O protein family9e-1994.7
CP002516:2305659:231392623139262314891966Escherichia coli KO11, complete genomephage O protein family1e-1687.8
CP002185:1770815:179096517909651791930966Escherichia coli W, complete genomehypothetical protein1e-1687.8
NC_016902:2305659:231392623139262314891966Escherichia coli KO11FL chromosome, complete genomephage O protein family1e-1687.8
CU928160:1668842:1689021168902116900401020Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein1e-1687.8
NC_011741:1668842:1689021168902116900401020Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-1687.8
NC_014562:1772842:178217317821731783090918Pantoea vagans C9-1 chromosome, complete genomehypothetical protein1e-1687.8
CU928145:1773642:1792151179215117931701020Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-1687
NC_011748:1408280:1415230141523014162491020Escherichia coli 55989, complete genomehypothetical protein2e-1687
NC_011751:1859606:1878313187831318793321020Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-1687
NC_011748:1773642:1792151179215117931701020Escherichia coli 55989, complete genomehypothetical protein2e-1687
CU928145:1408280:1415230141523014162491020Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-1687
NC_012947:2189533:218953321895332190498966Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completephage O protein family2e-1687
NC_013361:2138716:215808221580822159047966Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein2e-1686.7
NC_009801:1756610:177057117705711771536966Escherichia coli E24377A, complete genomephage O protein family3e-1582.8
NC_010468:2265423:227089522708952271809915Escherichia coli ATCC 8739, complete genomehypothetical protein9e-1478.2
NC_013316:2033906:2041094204109420421161023Clostridium difficile R20291, complete genomeputative conjugative transposon protein9e-1374.7
NC_011083:374000:387358387358388173816Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,DNA replication protein gp184e-1169.3
NC_012779:1939747:195602319560231956961939Edwardsiella ictaluri 93-146, complete genomereplication of DNA4e-1065.9
NC_016894:3988180:400134040013404002158819Acetobacterium woodii DSM 1030 chromosome, complete genomebacteriophage-like protein1e-0964.7
NC_011205:609464:629058629058629891834Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DNA replication protein gp183e-0963.2
NC_011740:2072173:210811821081182109065948Escherichia fergusonii ATCC 35469, complete genomehypothetical protein3e-0962.8
NC_007946:2625461:262807226280722628959888Escherichia coli UTI89, complete genomehypothetical protein4e-0962.8
NC_011601:2614691:261763726176372618584948Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomereplication protein4e-0962.8
NC_016860:364981:380860380860381681822Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage replication protein O5e-0962.4
NC_013361:3287671:329336032933603294181822Escherichia coli O26:H11 str. 11368 chromosome, complete genomereplication protein6e-0962
NC_019949:722829:743205743205743555351Mycoplasma cynos C142 complete genomePutative conjugative transposon protein3e-0859.7
NC_020418:3133831:313626531362653137101837Morganella morganii subsp. morganii KT, complete genomehypothetical protein3e-0653.1