Pre_GI: BLASTP Hits

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Query: NC_009705:78000:82045 Yersinia pseudotuberculosis IP 31758 plasmid_153kb, complete

Start: 82045, End: 82290, Length: 246

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014305:97055:108224108224108478255Erwinia billingiae Eb661 plasmid pEB170, complete sequenceTranscriptional regulator/antitoxin5e-2096.3
NC_016027:1902854:191462219146221914864243Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator8e-1785.9
NC_006672:47610:619766197662218243Gluconobacter oxydans 621H plasmid pGOX1, complete sequencePemI-like protein5e-1579.7
NC_004547:1873390:192428919242891924540252Erwinia carotovora subsp. atroseptica SCRI1043, complete genomesuppressor of growth inhibitory protein ChpA5e-1373.2
NC_015732:3017387:301887930188793019112234Spirochaeta caldaria DSM 7334 chromosome, complete genometranscriptional regulator/antitoxin, MazE5e-1166.2
NC_013173:2884887:289716528971652897404240Desulfomicrobium baculatum DSM 4028, complete genometranscriptional regulator/antitoxin, MazE3e-0857.4
NC_011060:244949:258930258930259172243Pelodictyon phaeoclathratiforme BU-1, complete genometranscriptional regulator/antitoxin, MazE2e-0857.4
NC_018515:4334240:436451543645154364748234Desulfosporosinus meridiei DSM 13257 chromosome, complete genomegrowth regulator1e-0755.1
NC_011884:831905:836184836184836426243Cyanothece sp. PCC 7425, complete genometranscriptional regulator/antitoxin, MazE2e-0754.3
NC_019897:128610:144050144050144325276Thermobacillus composti KWC4 chromosome, complete genomegrowth regulator3e-0753.5
NC_012814:23000:452144521445474261Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein7e-0752.8
NC_012815:23000:452144521445474261Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein7e-0752.8
NC_011835:23204:452454524545505261Bifidobacterium animalis subsp. lactis AD011 chromosome, completePemI-like protein7e-0752.8
NC_017216:22454:450814508145341261Bifidobacterium animalis subsp. lactis BLC1, complete genomehypothetical protein7e-0752.8
NC_017217:23000:452144521445474261Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein7e-0752.8
NC_012997:1446037:146768114676811467941261Teredinibacter turnerae T7901, complete genomeSpoVT/AbrB domain protein1e-0652.4
NC_011979:3112911:311619131161913116448258Geobacter sp. FRC-32, complete genometranscriptional regulator/antitoxin, MazE1e-0651.6
NC_012918:3009211:301608430160843016341258Geobacter sp. M21 chromosome, complete genomeMazE family transcriptional regulator2e-0651.6
NC_011761:2546081:256555625655562565807252Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completePemI family protein2e-0651.2
NC_011206:2447905:246738024673802467631252Acidithiobacillus ferrooxidans ATCC 53993, complete genometranscriptional regulator/antitoxin, MazE2e-0651.2
NC_015572:1:298612986130109249Methylomonas methanica MC09 chromosome, complete genometranscriptional regulator/antitoxin, MazE9e-0648.9