Pre_GI: BLASTP Hits

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Query: NC_009664:63230:73709 Kineococcus radiotolerans SRS30216, complete genome

Start: 73709, End: 75007, Length: 1299

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009664:4696961:4754108475410847554901383Kineococcus radiotolerans SRS30216, complete genomeextracellular solute-binding protein family 12e-50200
NC_015145:3657103:3668072366807236693851314Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family9e-24111
NC_018720:311844:3222713222713236261356Bifidobacterium asteroides PRL2011 chromosome, complete genomeABC transporter, extracellular substrate binding protein9e-22105
NC_013729:2157785:2188047218804721893661320Kribbella flavida DSM 17836, complete genomeextracellular solute-binding protein family 11e-21104
NC_007761:57199:7815178151794371287Rhizobium etli CFN 42, complete genomeprobable sugar ABC transporter, substrate-binding protein4e-21102
NC_016582:10159486:1019894910198949102001241176Streptomyces bingchenggensis BCW-1 chromosome, complete genomeextracellular solute-binding protein2e-20100
NC_013093:1036772:1083604108360410848901287Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 12e-20100
NC_012669:1011473:1031381103138110327061326Beutenbergia cavernae DSM 12333, complete genomeextracellular solute-binding protein family 11e-1997.8
NC_013406:1217385:1219223121922312205481326Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-1378.2
NC_020995:751311:7625637625637638551293Enterococcus casseliflavus EC20, complete genomehypothetical protein7e-1375.5
NC_002570:1195356:1209140120914012104441305Bacillus halodurans C-125, complete genomehypothetical protein3e-1273.6
NC_014652:163347:1809161809161822321317Caldicellulosiruptor hydrothermalis 108 chromosome, completeextracellular solute-binding protein family 14e-1272.8
NC_020260:440000:4639564639564652451290Cronobacter sakazakii Sp291, complete genomeABC transporter periplasmic binding protein5e-1272.8
NC_016612:361417:3791213791213804071287Klebsiella oxytoca KCTC 1686 chromosome, complete genomeoligogalacturonide transport system substrate-binding protein8e-1272
NC_020134:1783000:1783007178300717843291323Clostridium stercorarium subsp. stercorarium DSM 8532, completeextracellular solute-binding protein, family 18e-1272
NC_019896:3281193:3301197330119733024621266Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein1e-1068.2
NC_012925:140000:1545701545701558441275Streptococcus suis P1/7, complete genomeextracellular solute-binding lipoprotein1e-1068.2
NC_012924:142500:1543751543751556491275Streptococcus suis SC84, complete genomeextracellular solute-binding lipoprotein1e-1068.2
NC_012926:140000:1543541543541556281275Streptococcus suis BM407 chromosome, complete genomeextracellular solute-binding lipoprotein1e-1068.2
NC_009443:142500:1541291541291555561428Streptococcus suis 98HAH33, complete genomesugar ABC transporter periplasmic protein2e-1067.8
NC_009442:142500:154225154225155079855Streptococcus suis 05ZYH33 chromosome, complete genomesugar ABC transporter periplasmic protein5e-1065.9
NC_016641:2618587:2645924264592426471771254Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein5e-1065.9
NC_014831:1818968:1838590183859018399481359Thermaerobacter marianensis DSM 12885 chromosome, complete genomecarbohydrate ABC transporter substrate-binding protein, CUT1 family6e-1065.9
NC_003366:461602:4790084790084802761269Clostridium perfringens str. 13, complete genomehypothetical protein1e-0964.7
NC_012880:2399205:2416897241689724181891293Dickeya dadantii Ech703, complete genomeextracellular solute-binding protein family 12e-0860.8
NC_013406:303218:3367583367583380501293Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein3e-0860.1
NC_019896:1989997:1999551199955120007561206Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeSugar ABC transporter substrate-binding protein4e-0859.7
NC_020210:1951746:1962799196279919641211323Geobacillus sp. GHH01, complete genomeExtracellular solute-binding protein family 11e-0757.8
NC_015690:2039215:2052584205258420539121329Paenibacillus mucilaginosus KNP414 chromosome, complete genomeextracellular solute-binding protein2e-0757
NC_012669:4118230:4129844412984441311091266Beutenbergia cavernae DSM 12333, complete genomeextracellular solute-binding protein family 14e-0756.6
NC_014618:586240:5922685922685935151248Enterobacter cloacae SCF1 chromosome, complete genomeextracellular solute-binding protein7e-0755.5
NC_016935:2567039:2601872260187226032001329Paenibacillus mucilaginosus 3016 chromosome, complete genomeextracellular solute-binding protein3e-0653.5