Pre_GI: BLASTP Hits

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Query: NC_009664:4696961:4713843 Kineococcus radiotolerans SRS30216, complete genome

Start: 4713843, End: 4714274, Length: 432

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:188500:197464197464197859396Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative acetyltransferase5e-2199.8
NC_017955:3670670:367067036706703671068399Modestobacter marinus, complete genomehypothetical protein4e-2096.7
NC_003305:693810:706318706318706704387Agrobacterium tumefaciens str. C58 chromosome linear, completeacetyltransferase2e-1477.8
NC_003063:1358738:136805213680521368438387Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein2e-1477.8