Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4670652 Kineococcus radiotolerans SRS30216, complete genome

Start: 4670652, End: 4671248, Length: 597

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:1445369:146569314656931466124432Kitasatospora setae KM-6054, complete genomeputative MerR family transcriptional regulator3e-22104
NC_003888:3111998:312967031296703130077408Streptomyces coelicolor A3(2), complete genomeMerR-family transcriptional regulator2e-1995.5
NC_016906:4562874:456287445628744563290417Gordonia polyisoprenivorans VH2 chromosome, complete genomeMerR family transcriptional regulator7e-1993.6
NC_013510:810525:8258188258188271671350Thermomonospora curvata DSM 43183, complete genomealdo/keto reductase9e-1993.2
NC_013595:4031947:403559340355934036012420Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, MerR family1e-1789.7
NC_014828:1632000:164432016443201644715396Ethanoligenens harbinense YUAN-3 chromosome, complete genometranscriptional regulator, MerR family8e-1683.6
NC_015953:2059083:208096520809652081408444Streptomyces sp. SirexAA-E chromosome, complete genomeMerR family transcriptional regulator1e-1479.3
NC_014479:509919:517484517484517843360Bacillus subtilis subsp. spizizenii str. W23 chromosome, completetranscription regulator2e-1478.6
NC_009617:648000:667762667762668130369Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeMerR family transcriptional regulator1e-1376.6
NC_010943:1332243:134273713427371343207471Stenotrophomonas maltophilia K279a, complete genomeputative MerR family transcriptional regulator2e-1272
NC_016641:2291363:231169223116922312069378Paenibacillus terrae HPL-003 chromosome, complete genomeMerR family transcriptional regulator3e-1271.6
NC_016935:3103430:311255631125563112909354Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein5e-1270.9
NC_019897:128610:144922144922145389468Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator8e-1270.1
NC_013169:2423863:243967624396762440092417Kytococcus sedentarius DSM 20547, complete genomepredicted transcriptional regulator8e-1270.1
NC_014551:2510000:254866625486662549109444Bacillus amyloliquefaciens DSM 7, complete genomeMerR type transcriptional regulator2e-1169.3
NC_015161:792955:804987804987805517531Deinococcus proteolyticus MRP chromosome, complete genometranscriptional regulator, MerR family2e-1168.9
NC_017138:1812000:182766918276691828052384Bacillus megaterium WSH-002 chromosome, complete genomeHTH transcriptional regulator MerR family6e-1167.4
NC_016935:4117485:412867941286794129050372Paenibacillus mucilaginosus 3016 chromosome, complete genomeputative DNA binding protein9e-1167
NC_015690:6521740:653935865393586539729372Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative DNA binding protein9e-1167
NC_015913:624859:6414156414156426561242Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomefused DNA binding domain of the MerR-like transcription regulator and aldo/keto reductase family oxidoreductase1e-1066.6
NC_020410:2509057:251546425154642515907444Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeMerR type transcriptional regulator2e-1065.5
NC_003888:7866148:787360078736007873947348Streptomyces coelicolor A3(2), complete genomeMerR-family transcriptional regulator5e-1064.3
NC_015690:3477573:350878135087813509230450Paenibacillus mucilaginosus KNP414 chromosome, complete genomeMerR family transcriptional regulator5e-1064.3
NC_013517:1916020:193559119355911935974384Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, MerR family6e-1063.9
NC_016641:2394628:239911823991182399567450Paenibacillus terrae HPL-003 chromosome, complete genomeMerR family transcriptional regulator8e-1063.5
NC_011772:4606000:460976846097684610181414Bacillus cereus G9842, complete genometranscriptional regulator, MerR family3e-0962
NC_012704:376783:381535381535381951417Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, MerR family5e-0960.8
NC_011660:2541632:254267125426712543039369Listeria monocytogenes HCC23 chromosome, complete genomeMerR family transcriptional regulator6e-0960.8
NC_016513:810259:829124829124829396273Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeMerR family transcriptional regulator9e-0960.1
NC_016935:3819500:384671238467123847119408Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator MerR1e-0859.7
NC_021182:3525523:355052435505243550982459Clostridium pasteurianum BC1, complete genomeputative transcriptional regulator3e-0858.5
NC_003909:927955:944980944980945339360Bacillus cereus ATCC 10987, complete genometranscriptional regulator, MerR family2e-0858.5
NC_012982:711122:731780731780732181402Hirschia baltica ATCC 49814, complete genometranscriptional regulator, MerR family3e-0858.2
NC_013406:3672857:368187436818743682317444Paenibacillus sp. Y412MC10 chromosome, complete genomeMerR family transcriptional regulator4e-0858.2
NC_013939:1841890:185576718557671856183417Deferribacter desulfuricans SSM1, complete genomeMerR family transcriptional regulator4e-0858.2
NC_017208:4662500:466498346649834665396414Bacillus thuringiensis serovar chinensis CT-43 chromosome, completemercuric resistance operon5e-0857.8
NC_014209:787535:798612798612799004393Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,transcriptional regulator, MerR family1e-0756.6
NC_013921:755800:771016771016771408393Thermoanaerobacter italicus Ab9 chromosome, complete genometranscriptional regulator, MerR family1e-0756.6
NC_014964:1608575:161941216194121619804393Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeregulatory protein MerR1e-0756.6
NC_010321:1616362:162719916271991627591393Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeMerR family transcriptional regulator1e-0756.6
NC_019896:17873:253802538025796417Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeHTH-type transcriptional regulator YyaN1e-0756.2
NC_012225:316000:319930319930320313384Brachyspira hyodysenteriae WA1, complete genometranscriptional regulator, MerR family2e-0755.8
NC_015690:3941113:397389539738953974401507Paenibacillus mucilaginosus KNP414 chromosome, complete genomeMerR family transcriptional regulator2e-0755.5
NC_016935:1365463:139329713932971393803507Paenibacillus mucilaginosus 3016 chromosome, complete genomeMerR family transcriptional regulator3e-0754.7
NC_016584:1912000:193310019331001933486387Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator4e-0754.7
NC_012914:1923500:192363119236311924137507Paenibacillus sp. JDR-2, complete genometranscriptional regulator, MerR family4e-0754.7
NC_012778:207415:208340208340208777438Eubacterium eligens ATCC 27750, complete genomeMerR family transcriptional regulator, mercuric resistance operon regulatory protein6e-0753.9
NC_011894:4911500:492472249247224925156435Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, MerR family1e-0653.1
NC_015977:3424178:352151035215103521947438Roseburia hominis A2-183 chromosome, complete genomeMerR family transcriptional regulator1e-0653.1
NC_015690:3477573:351354835135483513925378Paenibacillus mucilaginosus KNP414 chromosome, complete genomeMerR family transcriptional regulator1e-0653.1
NC_010655:1365798:139296413929641393392429Akkermansia muciniphila ATCC BAA-835, complete genometranscriptional regulator, MerR family1e-0653.1
NC_016641:3772981:379657637965763797082507Paenibacillus terrae HPL-003 chromosome, complete genomeMerR family transcriptional regulator1e-0652.8
NC_013406:4023367:403074940307494031144396Paenibacillus sp. Y412MC10 chromosome, complete genomeMerR family transcriptional regulator1e-0652.8
NC_013169:87269:957209572096109390Kytococcus sedentarius DSM 20547, complete genomepredicted transcriptional regulator1e-0652.8
NC_008782:1917634:193523319352331935721489Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family2e-0652.4
NC_011753:3088952:310870531087053109169465Vibrio splendidus LGP32 chromosome 1, complete genometranscriptional regulator2e-0652.4
NC_021064:1789980:179278917927891793196408Propionibacterium avidum 44067, complete genomeMerR family transcriptional regulator3e-0651.6
NC_011969:4655602:465621846562184656949732Bacillus cereus Q1 chromosome, complete genometranscriptional activator4e-0651.6
NC_008345:3394154:339903633990363399425390Shewanella frigidimarina NCIMB 400, complete genometranscriptional regulator, MerR family protein4e-0651.2
NC_016114:648422:652656652656653057402Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeMerR family transcriptional regulator5e-0650.8
NC_011663:2568190:258565425856542586055402Shewanella baltica OS223 chromosome, complete genomeMerR family transcriptional regulator7e-0650.4
NC_018681:5378197:539881353988135399565753Nocardia brasiliensis ATCC 700358 chromosome, complete genomealbicidin resistance domain-containing protein8e-0650.4