Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4532979 Kineococcus radiotolerans SRS30216, complete genome

Start: 4532979, End: 4534715, Length: 1737

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003888:7028165:7049382704938270511511770Streptomyces coelicolor A3(2), complete genomeintegral membrane lysyl-tRNA synthetase3e-104379
NC_016887:55000:7624676246794493204Nocardia cyriacigeorgica GUH-2, complete genomelysyl-tRNA synthetase1e-97357
NC_007777:3231649:3233966323396632358971932Frankia sp. CcI3, complete genomeprotein of unknown function DUF4701e-86321
NC_015425:718384:7386537386537412622610Clostridium botulinum BKT015925 chromosome, complete genomeLysyl transferase6e-27122
NC_013161:1023716:1029046102904610307161671Cyanothece sp. PCC 8802, complete genomeprotein of unknown function DUF4703e-26120
NC_011726:1023690:1029020102902010306901671Cyanothece sp. PCC 8801, complete genomeprotein of unknown function DUF4703e-26120
NC_014656:1536540:1551871155187115544442574Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein2e-20101
NC_011959:972798:9766519766519794222772Thermomicrobium roseum DSM 5159, complete genomeFamily of unknown function (DUF470) family8e-1995.9
NC_006087:1483761:1503539150353915059292391Leifsonia xyli subsp. xyli str. CTCB07, complete genomelysyl-tRNA synthetase1e-1895.5
NC_018720:1510084:1510084151008415126932610Bifidobacterium asteroides PRL2011 chromosome, complete genomehypothetical protein2e-1894.4
NC_004578:4499143:4499143449914345017852643Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-1894
NC_021182:4310900:4327777432777743294471671Clostridium pasteurianum BC1, complete genomehypothetical protein4e-1893.6
NC_009806:35990:4104641046420861041Kineococcus radiotolerans SRS30216 plasmid pKRAD01, completehypothetical protein3e-1790.5
NC_014633:837588:8375888375888401282541Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencehypothetical protein4e-1686.7
NC_014718:791528:8102868102868130362751Burkholderia rhizoxinica HKI 454 chromosome, complete genomeOXACILLIN RESISTANCE-ASSOCIATED PROTEIN FMTC9e-1685.9
NC_014364:1263427:1268217126821712707932577Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF4708e-1685.9
NC_014654:895298:9007429007429017821041Halanaerobium sp. 'sapolanicus' chromosome, complete genomeprotein of unknown function DUF4708e-1479.3
NC_015516:1222632:1226859122685912292852427Melissococcus plutonius ATCC 35311, complete genomehypothetical protein1e-1379
NC_017300:1045555:1057638105763810603342697Corynebacterium pseudotuberculosis 1002 chromosome, completehypothetical protein4e-1273.6
NC_016781:1039716:1060156106015610628522697Corynebacterium pseudotuberculosis 3/99-5 chromosome, completehypothetical protein4e-1273.6
NC_017031:1039548:1059988105998810626842697Corynebacterium pseudotuberculosis P54B96 chromosome, completehypothetical protein4e-1273.6
NC_016932:1041306:1051781105178110544772697Corynebacterium pseudotuberculosis 316 chromosome, complete genomehypothetical protein6e-1273.2
NC_017301:1037519:1059801105980110624972697Corynebacterium pseudotuberculosis C231 chromosome, completehypothetical protein5e-1273.2
NC_017303:1039562:1060002106000210626982697Corynebacterium pseudotuberculosis I19 chromosome, complete genomehypothetical protein5e-1273.2
NC_017305:1037133:1057573105757310602692697Corynebacterium pseudotuberculosis PAT10 chromosome, completehypothetical protein5e-1273.2
NC_014329:1041556:1060165106016510628612697Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein5e-1273.2
NC_015683:1146913:1154573115457311572542682Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein1e-1171.6
NC_017317:1143378:1151723115172311544042682Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein1e-1068.9