Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4516750 Kineococcus radiotolerans SRS30216, complete genome

Start: 4516750, End: 4517262, Length: 513

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013510:1295439:130282713028271303306480Thermomonospora curvata DSM 43183, complete genomeregulator of ribonuclease activity A6e-48189
NC_008343:61191:701307013070645516Granulibacter bethesdensis CGDNIH1, complete genomeS-adenosylmethionine:2-demethylmenaquinone methyltransferase7e-39159
NC_012560:2315350:232624623262462326734489Azotobacter vinelandii DJ, complete genomeRegulator of ribonuclease activity A, RraA9e-37152
NC_021150:2315362:232625823262582326746489Azotobacter vinelandii CA6, complete genomeribonuclease activity regulator protein RraA9e-37152
NC_009348:3261500:328116932811693281651483Aeromonas salmonicida subsp. salmonicida A449, complete genomeribonuclease activity regulator protein RraA3e-31134
NC_010519:71365:943079430794807501Haemophilus somnus 2336 chromosome, complete genomeribonuclease activity regulator protein RraA5e-28123
NC_008309:190550:221104221104221604501Haemophilus somnus 129PT, complete genomeregulator of ribonuclease activity A7e-28122
NC_011992:1505106:151202215120221512528507Acidovorax ebreus TPSY, complete genomeregulator of ribonuclease activity A3e-27121
NC_017187:325229:345460345460345942483Arcobacter butzleri ED-1, complete genomeS-adenosylmethionine:2-demethylmenaquinone methyltransferase1e-1892.4
NC_015873:790961:800227800227800916690Megasphaera elsdenii DSM 20460, complete genomedimethylmenaquinone methyltransferase7e-1683.2
NC_015137:2616222:262897226289722629649678Burkholderia sp. CCGE1001 chromosome 2, complete sequenceDimethylmenaquinone methyltransferase2e-1581.6
NC_009512:1518113:153624715362471536885639Pseudomonas putida F1, complete genomeDimethylmenaquinone methyltransferase9e-1579.7
NC_015733:1976752:199801119980111998688678Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-1478.2
NC_010511:3947948:395954139595413960167627Methylobacterium sp. 4-46 chromosome, complete genomedimethylmenaquinone methyltransferase2e-1375.1
NC_016048:3899878:391144839114483912131684Oscillibacter valericigenes Sjm18-20, complete genomealdolase2e-1374.7
NC_014910:1050706:105552010555201056194675Alicycliphilus denitrificans BC chromosome, complete genomedimethylmenaquinone methyltransferase3e-1374.7
NC_010505:3690000:371358537135853714232648Methylobacterium radiotolerans JCM 2831, complete genomeDimethylmenaquinone methyltransferase1e-1272.4
NC_012660:4734363:473569747356974736362666Pseudomonas fluorescens SBW25 chromosome, complete genomeputative aldolase2e-1272
NC_014258:127500:140638140638141330693Pantoea vagans C9-1 plasmid pPag3, complete sequenceputative demethylmenaquinone methyltransferase2e-1271.6
NC_011892:352652:361972361972362682711Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeDimethylmenaquinone methyltransferase4e-1270.9
NC_015186:2165628:218785521878552188535681Acidiphilium multivorum AIU301, complete genomeputative 4-carboxy-4-hydroxy-2-oxoadipate aldolase4e-1270.9
NC_010086:1816378:182093918209391821637699Burkholderia multivorans ATCC 17616 chromosome 2, completeDimethylmenaquinone methyltransferase4e-1270.5
NC_011894:957897:967729967729968400672Methylobacterium nodulans ORS 2060, complete genomeDimethylmenaquinone methyltransferase1e-1169.3
NC_015953:2681331:269576726957672696390624Streptomyces sp. SirexAA-E chromosome, complete genomeDimethylmenaquinone methyltransferase1e-1168.9
NC_015389:616430:635976635976636683708Coriobacterium glomerans PW2 chromosome, complete genomeDimethylmenaquinone methyltransferase4e-1167.4
NC_012792:1091669:110844111084411109112672Variovorax paradoxus S110 chromosome 2, complete genomeDimethylmenaquinone methyltransferase4e-1167.4
NC_014910:1765065:179211617921161792748633Alicycliphilus denitrificans BC chromosome, complete genomedimethylmenaquinone methyltransferase1e-1065.9
NC_015458:1692401:170369917036991704172474Pusillimonas sp. T7-7 chromosome, complete genomehypothetical protein2e-1065.1
NC_016582:93754:974799747998117639Streptomyces bingchenggensis BCW-1 chromosome, complete genomedimethylmenaquinone methyltransferase9e-0959.7
NC_013093:4890557:490029249002924900882591Actinosynnema mirum DSM 43827, complete genomeDimethylmenaquinone methyltransferase9e-0959.7
NC_015634:652000:652074652074652694621Bacillus coagulans 2-6 chromosome, complete genomeDimethylmenaquinone methyltransferase2e-0858.5
NC_016023:579000:602240602240602860621Bacillus coagulans 36D1 chromosome, complete genomeDimethylmenaquinone methyltransferase6e-0857
NC_007951:2233676:223367622336762234383708Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative dimethylmenaquinone methyltransferase5e-0857
NC_015563:4206112:421030442103044211011708Delftia sp. Cs1-4 chromosome, complete genomeDimethylmenaquinone methyltransferase2e-0755.1
NC_015976:814922:820533820533821201669Sphingobium sp. SYK-6, complete genomeputative aldolase2e-0754.7
NC_006526:1976779:200622020062202006927708Zymomonas mobilis subsp. mobilis ZM4, complete genomedemethylmenaquinone methyltransferase3e-0754.7
NC_013665:849508:8543158543158556011287Methanocella paludicola SANAE, complete genome3-hexulose-6-phosphate synthase3e-0754.7
NC_012522:3038890:304859130485913049262672Rhodococcus opacus B4, complete genomeputative 4-carboxy-4-hydroxy-2-oxoadipate aldolase3e-0754.3
NC_015727:1076927:108099210809921081660669Cupriavidus necator N-1 plasmid BB1p, complete sequencedimethylmenaquinone methyltransferase MenG9e-0752.8
NC_014206:2971304:298171029817102982435726Geobacillus sp. C56-T3 chromosome, complete genomedimethylmenaquinone methyltransferase1e-0652.4
NC_020911:3046916:306754330675433068232690Octadecabacter antarcticus 307, complete genomehypothetical protein1e-0652.4
NC_009712:669647:6707536707536720391287Candidatus Methanoregula boonei 6A8, complete genomebifunctional hexulose-6-phosphate synthase/ribonuclease regulator2e-0652
NC_008705:2763131:2790870279087027923991530Mycobacterium sp. KMS, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase2e-0652
NC_008146:2744612:2772982277298227745111530Mycobacterium sp. MCS, complete genome5-carboxymethyl-2-hydroxymuconate delta-isomerase2e-0652
NC_018581:759932:778611778611779300690Gordonia sp. KTR9 chromosome, complete genomeDemethylmenaquinone methyltransferase2e-0652
NC_014974:1076565:108607210860721086740669Thermus scotoductus SA-01 chromosome, complete genomedimethylmenaquinone methyltransferase2e-0651.6
NC_014391:1910273:193815719381571938861705Micromonospora aurantiaca ATCC 27029 chromosome, complete genomedimethylmenaquinone methyltransferase4e-0650.8
NC_019977:253895:2734122734122745631152Methanomethylovorans hollandica DSM 15978, complete genomeDemethylmenaquinone methyltransferase5e-0650.4
NC_009511:2726296:274098727409872741685699Sphingomonas wittichii RW1 chromosome, complete genomedimethylmenaquinone methyltransferase9e-0649.7