Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:4423829:4451728 Kineococcus radiotolerans SRS30216, complete genome

Start: 4451728, End: 4452351, Length: 624

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009921:3666898:370507837050783705695618Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-28126
NC_013929:2583849:258533825853382585931594Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator2e-27122
NC_009921:3666898:373621137362113736819609Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family5e-25114
NC_013093:5791961:581324958132495813830582Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family2e-22105
NC_009480:99640:128542128542129288747Clavibacter michiganensis subsp. michiganensis NCPPB 382, completetranscriptional regulator, TetR family7e-1993.6
NC_013929:8525000:853867185386718539318648Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-1789.4
NC_014246:611275:636808636808637455648Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTetR family transcriptional regulator4e-1787.8
NC_009921:5275694:529638452963845297010627Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family6e-1684
NC_009921:5275694:529173252917325292325594Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family2e-1582
NC_017219:711431:711431711431712018588Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transcriptional regulator3e-1581.6
NC_009921:522000:551311551311551880570Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family2e-1479
NC_017221:495088:496425496425497156732Bifidobacterium longum subsp. longum KACC 91563 chromosome,AcrR family transcriptional regulator2e-1375.9
NC_005773:866157:882507882507883145639Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, TetR family5e-1374.3
NC_017221:495088:514700514700515314615Bifidobacterium longum subsp. longum KACC 91563 chromosome,transcriptional regulator2e-1168.6
NC_013595:9994000:100114381001143810012019582Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family3e-1065.1
NC_009921:3666898:367405936740593674655597Frankia sp. EAN1pec, complete genomehypothetical protein8e-1063.5
NC_008618:1487000:150279615027961503530735Bifidobacterium adolescentis ATCC 15703, complete genomepossible TetR-type transcriptional regulator5e-0961.2
NC_008618:1487000:149429714942971494932636Bifidobacterium adolescentis ATCC 15703, complete genomepossible TetR-type transcriptional regulator1e-0756.6
NC_006177:1060428:107883110788311079454624Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator2e-0756.2
NC_015389:1858732:187731018773101877954645Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, TetR family3e-0755.1
NC_014152:191200:203522203522204064543Thermincola sp. JR, complete genometranscriptional regulator, TetR family1e-0653.5
NC_015957:8677395:868260586826058683288684Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR2e-0652.8
NC_014158:1651326:166301016630101663705696Tsukamurella paurometabola DSM 20162 chromosome, complete genometranscriptional regulator, TetR family5e-0650.8