Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4448813 Kineococcus radiotolerans SRS30216, complete genome

Start: 4448813, End: 4449631, Length: 819

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007086:1032107:105490110549011055785885Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-60231
NC_007492:3180480:321114232111423212044903Pseudomonas fluorescens PfO-1, complete genomehypothetical protein7e-48191
NC_010501:4787963:480316148031614804084924Pseudomonas putida W619, complete genomeprotein of unknown function UPF01878e-48190
NC_021150:3282702:328465532846553285575921Azotobacter vinelandii CA6, complete genomehypothetical protein2e-45182
NC_012560:3282704:328465732846573285577921Azotobacter vinelandii DJ, complete genomehypothetical protein2e-45182
NC_013716:1618249:161991216199121620832921Citrobacter rodentium ICC168, complete genomehypothetical protein1e-34147
NC_011742:1574036:159377015937701594684915Escherichia coli S88 chromosome, complete genomehypothetical protein2e-33142
NC_008253:1534840:155355715535571554471915Escherichia coli 536, complete genomehypothetical protein YneE (putative membrane protein)2e-33142
CP002797:1591000:160673816067381607511774Escherichia coli NA114, complete genomeHypothetical protein7e-33140
NC_015422:1116359:113349011334901134431942Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein7e-33140
NC_015422:1116359:112148611214861122427942Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein7e-33140
NC_014924:3065430:308088530808853081799915Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeputative transmembrane protein1e-31136
NC_005085:659378:663761663761664678918Chromobacterium violaceum ATCC 12472, complete genomeprobable transmembrane protein2e-31136
NC_015563:3203012:325568032556803256591912Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein1e-30134
NC_012856:1:186931869319640948Ralstonia pickettii 12D chromosome 1, complete genomeprotein of unknown function UPF01878e-30130
NC_003295:3688000:369110836911083692028921Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN3e-28125
NC_020064:2960332:298341029834102984327918Serratia marcescens FGI94, complete genomehypothetical protein5e-26118
NC_016845:2781438:279960227996022800519918Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein3e-26118
NC_012731:2739964:275919227591922760109918Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein7e-26117
NC_019904:2010999:201345320134532014367915Echinicola vietnamensis DSM 17526 chromosome, complete genomehypothetical protein2e-25115
NC_014041:4335948:435067443506744351564891Zunongwangia profunda SM-A87 chromosome, complete genomehypothetical protein6e-25114
NC_010694:1966676:197975519797551980708954Erwinia tasmaniensis, complete genomeConserved hypothetical protein YneE7e-25114
NC_015723:961909:971412971412972269858Cupriavidus necator N-1 chromosome 2, complete sequencehypothetical protein2e-23109
NC_014623:4683671:471117947111794711949771Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein8e-23107
NC_010681:121647:138700138700139611912Burkholderia phytofirmans PsJN chromosome 1, complete sequenceprotein of unknown function UPF01872e-21103
NC_000911:352263:390905390905391729825Synechocystis sp. PCC 6803, complete genomehypothetical protein6e-21101
NC_017039:352263:391007391007391831825Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein6e-21101
NC_017052:352251:390995390995391819825Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein6e-21101
NC_017277:352263:390905390905391729825Synechocystis sp. PCC 6803, complete genomehypothetical protein6e-21101
NC_015914:5470926:547593554759355476711777Cyclobacterium marinum DSM 745 chromosome, complete genomehypothetical protein8e-21100
NC_014118:1559770:157241815724181573416999Burkholderia sp. CCGE1002 chromosome chromosome 2, completemembrane protein-like protein1e-1894
NC_008314:1559102:1571933157193315729401008Ralstonia eutropha H16 chromosome 2, complete sequenceconserved hypothetical membrane spanning protein8e-1890.9
NC_011726:213956:215909215909216853945Cyanothece sp. PCC 8801, complete genomeprotein of unknown function UPF01871e-1687
NC_013161:212941:214894214894215838945Cyanothece sp. PCC 8802, complete genomeprotein of unknown function UPF01871e-1687