Pre_GI: BLASTP Hits

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Query: NC_009664:4423829:4425527 Kineococcus radiotolerans SRS30216, complete genome

Start: 4425527, End: 4426396, Length: 870

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009921:4186000:419360741936074194275669Frankia sp. EAN1pec, complete genomeNADP oxidoreductase coenzyme F420-dependent7e-31134
NC_012560:3200961:320695832069583207620663Azotobacter vinelandii DJ, complete genomeNADP oxidoreductase coenzyme F420-dependent family protein1e-26120
NC_021150:3200959:320695632069563207618663Azotobacter vinelandii CA6, complete genomeNADP oxidoreductase coenzyme F420-dependent family protein1e-26120
NC_015379:4249238:427351342735134274172660Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative NADP oxidoreductase, coenzyme F420-dependent4e-25115
NC_016582:11672500:116888771168887711689536660Streptomyces bingchenggensis BCW-1 chromosome, complete genomeNADP oxidoreductase, coenzyme F420-dependent7e-24111
NC_009664:4423829:468102846810284681675648Kineococcus radiotolerans SRS30216, complete genomeNADP oxidoreductase coenzyme F420-dependent5e-22105
NC_008268:7485710:749409674940967494764669Rhodococcus sp. RHA1, complete genomehypothetical protein9e-1580.9
NC_018681:3541484:354667435466743547399726Nocardia brasiliensis ATCC 700358 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent3e-1479.3
NC_011365:1171536:117766811776681178363696Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomecoenzyme F420-dependent NADP oxidoreductase8e-1477.8
NC_016641:438500:444112444112444843732Paenibacillus terrae HPL-003 chromosome, complete genomecoenzyme F420-dependent NADP oxidoreductase4e-1375.5
NC_012988:4292815:431403443140344314873840Methylobacterium extorquens DM4, complete genomeNADP oxidoreductase, coenzyme F420-dependent4e-1272.4
NC_010508:2776283:279071127907112791472762Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceNADP oxidoreductase coenzyme F420-dependent5e-1272
NC_016047:2658000:267755026775502678284735Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecoenzyme F420-dependent NADP oxidoreductase2e-1170.1
NC_015690:1348691:137254013725401373271732Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent2e-1169.7
NC_010551:2007926:201797920179792018806828Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceNADP oxidoreductase coenzyme F420-dependent3e-1169.3
NC_015690:1348691:136344613634461364171726Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent3e-1169.3
NC_016935:1868839:188370518837051884430726Paenibacillus mucilaginosus 3016 chromosome, complete genomecoenzyme F420-dependent NADP oxidoreductase3e-1169.3
NC_014479:2505823:251711425171142517848735Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein5e-1168.6
NC_016935:1868839:189623318962331896964732Paenibacillus mucilaginosus 3016 chromosome, complete genomecoenzyme F420-dependent NADP oxidoreductase6e-1168.2
NC_016935:1868839:188152818815281882271744Paenibacillus mucilaginosus 3016 chromosome, complete genomecoenzyme F420-dependent NADP oxidoreductase7e-1168.2
NC_015690:1348691:136127713612771361987711Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent1e-1067.4
NC_017271:1477323:148284414828441483578735Xanthomonas campestris pv. raphani 756C chromosome, completecoenzyme F420-dependent NADP oxidoreductase3e-0962.8
NC_015063:122000:819781978940744Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceNADP oxidoreductase coenzyme F420-dependent2e-0962.8
NC_015063:1:819781978940744Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceNADP oxidoreductase coenzyme F420-dependent2e-0962.8
NC_007492:3180480:319199931919993192733735Pseudomonas fluorescens PfO-1, complete genomeNADP oxidoreductase, coenzyme F420-dependent3e-0962.4
NC_010688:3515885:352519935251993525933735Xanthomonas campestris pv. campestris, complete genomeputative F420-dependent NADP reductase5e-0962
NC_003902:1416000:142259114225911423325735Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein5e-0962
NC_014973:54449:598695986960567699Geobacter sp. M18 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent8e-0961.2
NC_014973:1257625:126404212640421264680639Geobacter sp. M18 chromosome, complete genomeNADP oxidoreductase coenzyme F420-dependent4e-0755.5
NC_007492:3180480:319295531929553193701747Pseudomonas fluorescens PfO-1, complete genomeNADP oxidoreductase, coenzyme F420-dependent7e-0754.7
NC_002944:1881405:188362818836281884293666Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-0653.1