Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:3969609:3985091 Kineococcus radiotolerans SRS30216, complete genome

Start: 3985091, End: 3986137, Length: 1047

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013521:1976331:1988712198871219897731062Sanguibacter keddieii DSM 10542, complete genometype IV pilus assembly protein PilM7e-53207
NC_008609:1027838:1037113103711310381681056Pelobacter propionicus DSM 2379, complete genometype IV pilus assembly protein PilM4e-32139
NC_010814:1739706:1747510174751017485681059Geobacter lovleyi SZ, complete genometype IV pilus assembly protein PilM4e-30132
NC_008095:7139056:7151074715107471522611188Myxococcus xanthus DK 1622, complete genometype IV pilus biogenesis protein PilM4e-29129
NC_007498:2475781:2489552248955224906161065Pelobacter carbinolicus DSM 2380, complete genomeTfp pilus assembly protein, ATPase PilM5e-29128
NC_009483:2086021:2097825209782520988771053Geobacter uraniireducens Rf4 chromosome, complete genometype IV pilus assembly protein PilM2e-27123
NC_011979:3341099:3355168335516833562201053Geobacter sp. FRC-32, complete genometype IV pilus assembly protein PilM3e-27122
NC_015711:8909256:8921311892131189223391029Myxococcus fulvus HW-1 chromosome, complete genometype IV pilus assembly protein PilM2e-26120
NC_007298:219783:2267402267402278251086Dechloromonas aromatica RCB, complete genomeType IV pilus assembly protein PilM8e-25114
NC_014761:1405408:1420129142012914212741146Oceanithermus profundus DSM 14977 chromosome, complete genometype iv pilus assembly protein pilm3e-24112
NC_014972:3688000:3702652370265237036981047Desulfobulbus propionicus DSM 2032 chromosome, complete genometype IV pilus assembly protein PilM3e-23109
NC_008786:18688:3159031590326691080Verminephrobacter eiseniae EF01-2, complete genometype IV pilus assembly protein PilM4e-21102
NC_008825:3298506:3312593331259333136691077Methylibium petroleiphilum PM1, complete genomefimbrial assembly protein1e-20100
NC_016616:1233555:1240357124035712414361080Dechlorosoma suillum PS chromosome, complete genometype IV pilus assembly protein PilM2e-1997.1
NC_010002:6189733:6204541620454162056201080Delftia acidovorans SPH-1, complete genometype IV pilus assembly protein PilM2e-1997.1
NC_013173:2261396:2276697227669722777491053Desulfomicrobium baculatum DSM 4028, complete genometype IV pilus assembly protein PilM4e-1995.9
NC_015563:1172745:1178547117854711797611215Delftia sp. Cs1-4 chromosome, complete genometype IV pilus assembly protein PilM7e-1995.1
NC_015572:293665:3077793077793088401062Methylomonas methanica MC09 chromosome, complete genometype IV pilus assembly protein PilM2e-1893.2
NC_011992:717107:7278747278747289441071Acidovorax ebreus TPSY, complete genometype IV pilus assembly protein PilM4e-1892.8
NC_008782:752686:7692147692147702841071Acidovorax sp. JS42, complete genometype IV pilus assembly protein PilM4e-1892.4
NC_015731:2950874:2954718295471829558211104Nitrosomonas sp. Is79A3 chromosome, complete genometype IV pilus assembly protein PilM5e-1892
NC_008781:708811:7152977152977163761080Polaromonas naphthalenivorans CJ2, complete genometype IV pilus assembly protein PilM2e-1790.5
NC_014315:352395:3614793614793625971119Nitrosococcus watsoni C-113 chromosome, complete genometype IV pilus assembly protein PilM1e-1687.8
NC_007484:266594:2731322731322742501119Nitrosococcus oceani ATCC 19707, complete genomeType IV pilus assembly protein PilM1e-1687.8
NC_013722:2784000:2809445280944528105031059Xanthomonas albilineans, complete genomeprobable type iv pilus assembly protein pilm2e-1686.7
NC_016627:1807866:1820379182037918215601182Clostridium clariflavum DSM 19732 chromosome, complete genomeTfp pilus assembly protein, ATPase PilM4e-1685.9
NC_011884:1591430:1611997161199716130851089Cyanothece sp. PCC 7425, complete genometype IV pilus assembly protein PilM4e-1479.3
NC_008344:1899317:1917527191752719186511125Nitrosomonas eutropha C91, complete genometype IV pilus assembly protein PilM5e-1479
NC_007912:3403101:3415105341510534161721068Saccharophagus degradans 2-40, complete genomeresponse regulator receiver domain protein (CheY-like)1e-1377.4
NC_007645:6096345:6108335610833561093991065Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein, ATPase PilM6e-1375.5
NC_015740:636667:6441916441916452551065Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype IV pilus assembly protein PilM3e-1272.8
NC_014632:1914500:1944339194433919454211083Ilyobacter polytropus DSM 2926 chromosome, complete genomeTfp pilus assembly protein ATPase PilM1e-0964.7
NC_007775:1002934:1006632100663210077501119Synechococcus sp. JA-3-3Ab, complete genometype 4 fimbrial biogenesis protein PilM1e-0861.2
NC_009439:574437:5809415809415820051065Pseudomonas mendocina ymp, complete genometype IV pilus assembly protein PilM7e-0858.5
NC_015410:617020:6232906232906243541065Pseudomonas mendocina NK-01 chromosome, complete genometype IV pilus assembly protein PilM2e-0757.4
NC_009434:608765:617668617668618462795Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilM2e-0653.9