Pre_GI Gene

Some Help

Host: NC_007912 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007912:3403101 Saccharophagus degradans 2-40, complete genome

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
340310134075464446Preprotein translocase SecG subunitQuickGO ontologyBLASTP
340790934093931485Triosephosphate isomeraseQuickGO ontologyBLASTP
340942834105161089Phosphoglucosamine mutaseQuickGO ontologyBLASTP
34106783411187510Dihydropteroate synthaseQuickGO ontologyBLASTP
341119034133732184Peptidase M41 FtsHQuickGO ontologyBLASTP
34133773413871495type 4 fimbrial biogenesis protein PilPQuickGO ontologyBLASTP
34139243414538615Protein of unknown function UPF0044QuickGO ontologyBLASTP
34145403415103564periplasmic sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
341510534161721068response regulator receiver domain protein CheY-likeQuickGO ontologyBLASTP
341632934188692541penicillin-binding proteinQuickGO ontologyBLASTP
3418987341919921350S ribosomal protein L31QuickGO ontologyBLASTP
341937634215862211transcription elongation factor GreAQuickGO ontologyBLASTP
342159034226901101Carbamoyl-phosphate synthase large subunit glutamine-dependentQuickGO ontologyBLASTP
34230253423585561Carbamoyl-phosphate synthase small subunitQuickGO ontologyBLASTP
34237133424252540Dihydrodipicolinate reductaseQuickGO ontologyBLASTP
342436534256811317heat shock protein HslUQuickGO ontologyBLASTP