Pre_GI: BLASTP Hits

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Query: NC_009664:3718927:3721740 Kineococcus radiotolerans SRS30216, complete genome

Start: 3721740, End: 3722636, Length: 897

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012522:7596039:760349276034927604454963Rhodococcus opacus B4, complete genomehypothetical membrane protein2e-0963.5
NC_016768:2764000:276776727677672768699933Mycobacterium tuberculosis KZN 4207 chromosome, complete genomeantibiotic-transport membrane ABC transporter3e-0859.7
NC_009565:1629780:164607716460771647009933Mycobacterium tuberculosis F11, complete genomehypothetical antibiotic-transport integral membrane ABC transporter3e-0859.7
NC_002945:1621765:163823916382391639171933Mycobacterium bovis AF2122/97, complete genomeunidentified antibiotic-transport integral membrane ABC transporter3e-0859.7
NC_015848:1647523:166559316655931666525933Mycobacterium canettii CIPT 140010059, complete genomeputative unidentified antibiotic-transport integral membrane ABC transporter4e-0858.9
NC_016783:1274000:130727213072721308210939Corynebacterium diphtheriae INCA 402 chromosome, complete genomecytochrome aa3 controlling protein9e-0651.2
NC_016788:1214026:128238212823821283320939Corynebacterium diphtheriae HC04 chromosome, complete genomecytochrome aa3 controlling protein9e-0651.2
NC_016790:1218596:124977012497701250708939Corynebacterium diphtheriae VA01 chromosome, complete genomecytochrome aa3 controlling protein9e-0651.2
NC_016800:1243000:131154013115401312478939Corynebacterium diphtheriae BH8 chromosome, complete genomecytochrome aa3 controlling protein9e-0651.2
NC_002935:1237585:130928313092831310221939Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein9e-0651.2
NC_016782:1251796:128297212829721283910939Corynebacterium diphtheriae 241 chromosome, complete genomecytochrome aa3 controlling protein9e-0651.2
NC_016786:1251765:128294112829411283879939Corynebacterium diphtheriae HC01 chromosome, complete genomecytochrome aa3 controlling protein9e-0651.2
NC_016799:1268706:133842813384281339366939Corynebacterium diphtheriae 31A chromosome, complete genomecytochrome aa3 controlling protein9e-0651.2
NC_016802:1256287:128387312838731284811939Corynebacterium diphtheriae HC02 chromosome, complete genomecytochrome aa3 controlling protein9e-0651.2