Pre_GI: BLASTP Hits

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Query: NC_009664:3245210:3263212 Kineococcus radiotolerans SRS30216, complete genome

Start: 3263212, End: 3264831, Length: 1620

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013169:2423863:2423863242386324254881626Kytococcus sedentarius DSM 20547, complete genomedolichyl-phosphate-mannose--protein O-mannosyl transferase2e-108392
NC_018750:3249756:3253554325355432552661713Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein7e-104378
NC_013929:5952380:5970381597038159719581578Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein5e-97355
NC_003155:4441559:4445895444589544476341740Streptomyces avermitilis MA-4680, complete genomeintegral membrane protein2e-83310
NC_014246:536338:5363385363385380021665Mobiluncus curtisii ATCC 43063 chromosome, complete genomedolichyl-phosphate-mannose--protein O-mannosyl transferase7e-67255
NC_011898:2907017:2917915291791529198911977Clostridium cellulolyticum H10, complete genomeglycosyl transferase family 392e-1997.4
NC_012034:1925983:1957841195784119595411701Anaerocellum thermophilum DSM 6725, complete genomeglycosyl transferase family 391e-1171.6
NC_014392:1769803:1788281178828117899811701Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeglycosyl transferase family 393e-1170.9
NC_014720:980000:1019865101986510215651701Caldicellulosiruptor kronotskyensis 2002 chromosome, completeglycosyl transferase family 399e-1168.9
NC_015949:2418232:2437534243753424392851752Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeglycosyl transferase family protein2e-1067.8
NC_014314:1485500:1510937151093715121151179Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeglycosyl transferase family 39 protein1e-0861.6