Pre_GI: BLASTP Hits

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Query: NC_009664:1195630:1219110 Kineococcus radiotolerans SRS30216, complete genome

Start: 1219110, End: 1219676, Length: 567

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:2257166:227261322726132273110498Streptomyces cattleya NRRL 8057, complete genomeHTH-type transcriptional regulator pecS5e-29127
NC_009925:5957806:596064059606405961131492Acaryochloris marina MBIC11017, complete genometranscriptional regulator, MarR family1e-1686.3
NC_012721:109500:129270129270129809540Burkholderia glumae BGR1 chromosome 2, complete genomeTranscriptional regulator, MarR family protein2e-1685.5
NC_011283:819970:835107835107835613507Klebsiella pneumoniae 342 chromosome, complete genomeMarR family transcriptional regulator1e-1582.4
NC_008711:1224164:123368312336831234186504Arthrobacter aurescens TC1, complete genomeputative transcriptional regulator, MarR family2e-1582.4
NC_010501:4989455:499041949904194990925507Pseudomonas putida W619, complete genometranscriptional regulator, MarR family8e-1580.1
NC_014391:6000834:601967660196766020215540Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein MarR9e-1579.7
NC_006576:414696:427513427513428013501Synechococcus elongatus PCC 6301, complete genometranscriptional regulator1e-1479.3
NC_007604:1183497:119279211927921193292501Synechococcus elongatus PCC 7942, complete genometranscriptional regulator, MarR family1e-1479.3
NC_016628:763833:791320791320791802483Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, MarR family protein7e-1477
NC_007645:3712272:372537637253763725885510Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator6e-1477
NC_016745:123772:145693145693146214522Oceanimonas sp. GK1 chromosome, complete genomeMarR family transcriptional regulator9e-1270.1
NC_008321:3189974:320949732094973210033537Shewanella sp. MR-4, complete genometranscriptional regulator, MarR family2e-1168.9
NC_003295:2507850:252543025254302525927498Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN8e-1166.6
NC_014311:3348102:336288433628843363396513Ralstonia solanacearum PSI07 chromosome, complete genomeMarR family transcriptional regulator3e-1065.1
NC_014307:3240430:325987732598773260389513Ralstonia solanacearum CFBP2957 chromosome, complete genomeMarR family transcriptional regulator3e-1065.1
NC_014963:1951108:196689019668901967690801Terriglobus saanensis SP1PR4 chromosome, complete genomeregulatory protein MarR3e-1064.7
NC_016111:6175975:617936861793686179952585Streptomyces cattleya NRRL 8057, complete genomeMarR family transcriptional regulator5e-0753.9
NC_010572:4585500:459085645908564591413558Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative MarR-family transcriptional regulator4e-0651.2