Pre_GI: BLASTP Hits

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Query: NC_009656:6224221:6261451 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 6261451, End: 6262824, Length: 1374

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:6048516:608553960855396086111573Pseudomonas aeruginosa DK2 chromosome, complete genomesite-specific recombinase, phage integrase family protein4e-91335
NC_015633:2565753:2591438259143825927871350Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein3e-1790.1
NC_007951:1042291:1049518104951810510411524Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein6e-1789
NC_010322:1817598:1852561185256118539401380Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein3e-1686.7
NC_004578:5336773:5381679538167953831031425Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family8e-1685.5
NC_010322:5349000:5358502535850253599681467Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein4e-1583.2
NC_010424:825117:828685828685829536852Candidatus Desulforudis audaxviator MP104C, complete genomephage integrase family protein8e-1272
NC_015638:2045500:205110020511002051990891Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeTyrosine recombinase xerC1e-0965.1
NC_015573:813000:829706829706830560855Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein1e-0964.7
NC_006510:2910000:2939310293931029403231014Geobacillus kaustophilus HTA426, complete genomeintegrase/recombinase3e-0963.5
NC_005773:4282840:429044642904464291432987Pseudomonas syringae pv. phaseolicola 1448A, complete genomePhage integrase family domain protein8e-0962
NC_009615:3993187:399412339941233995028906Parabacteroides distasonis ATCC 8503 chromosome, complete genometyrosine type site-specific recombinase5e-0859.3
NC_014934:3809845:3821242382124238223691128Cellulophaga algicola DSM 14237 chromosome, complete genomeintegrase family protein1e-0758.2
NC_019960:260997:272856272856273749894Prevotella dentalis DSM 3688 chromosome 1, complete sequencesite-specific recombinase XerD1e-0757.8
NC_016510:2426150:246974824697482470641894Flavobacterium columnare ATCC 49512 chromosome, complete genomeintegrase/recombinase XerC3e-0757
NC_015573:1573621:158153515815351582389855Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeintegrase family protein4e-0756.2
NC_009253:2315958:232009723200972321002906Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein5e-0756.2
NC_020209:4312892:433922743392274339952726Pseudomonas poae RE*1-1-14, complete genomephage integrase family protein5e-0756.2
NC_013132:5942981:595668659566865957540855Chitinophaga pinensis DSM 2588, complete genomeintegrase family protein7e-0755.8
NC_009142:2480608:248410224841022485091990Saccharopolyspora erythraea NRRL 2338, complete genomeintegrase/recombinase1e-0654.7
NC_014933:220146:2444792444792456091131Bacteroides helcogenes P 36-108 chromosome, complete genomeintegrase family protein2e-0654.3
NC_016048:2055199:2072316207231620733231008Oscillibacter valericigenes Sjm18-20, complete genometyrosine recombinase XerC2e-0654.3
NC_003228:2010643:203162020316202032504885Bacteroides fragilis NCTC 9343, complete genomeputative tyrosine recombinase2e-0654.3
NC_019815:761480:775648775648776571924Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiintegrase/recombinase XerD2e-0653.9
NC_004547:3817656:3823518382351838245521035Erwinia carotovora subsp. atroseptica SCRI1043, complete genometyrosine recombinase3e-0653.5
NC_009253:389835:392779392779393693915Desulfotomaculum reducens MI-1 chromosome, complete genomephage integrase family protein3e-0653.5