Pre_GI: BLASTP Hits

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Query: NC_009632:921759:924167 Staphylococcus aureus subsp. aureus JH1 chromosome, complete

Start: 924167, End: 924499, Length: 333

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: A series of isogenic methicillin-resistant (MRSA) strains were isolated from a patient undergoing vancomycin treatment. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009487:921884:924292924292924624333Staphylococcus aureus subsp. aureus JH9 chromosome, completeXRE family transcriptional regulator5e-60229
NC_007168:1839382:185295318529531853291339Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-32137
NC_017190:3166000:317850431785043178935432Bacillus amyloliquefaciens LL3 chromosome, complete genomeSPBc2 prophage-derived HTH-type transcriptional regulator yonR1e-1375.1
NC_015589:2846000:285150428515042851917414Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1374.3
NC_009674:2985878:301907730190773019499423Bacillus cytotoxicus NVH 391-98 chromosome, complete genomehelix-turn-helix domain-containing protein7e-1269.3
NC_011660:2541632:257988525798852580220336Listeria monocytogenes HCC23 chromosome, complete genomehelix-turn-helix domain-containing protein4e-1166.6
NC_018704:176088:191129191129191449321Amphibacillus xylanus NBRC 15112, complete genomeputative DNA-binding protein2e-1064.3
NC_011375:749693:751627751627751977351Streptococcus pyogenes NZ131 chromosome, complete genomerepressor-phage associated3e-1063.9
NC_009332:1050353:106756510675651067915351Streptococcus pyogenes str. Manfredo chromosome, complete genomephage DNA-binding protein3e-1063.9
NC_012471:781063:786052786052786402351Streptococcus equi subsp. equi 4047, complete genomephage repressor4e-1063.5
NC_012471:2080902:210324921032492103599351Streptococcus equi subsp. equi 4047, complete genomephage DNA-binding protein3e-0960.8
NC_012891:1100726:111421611142161114566351Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,putative phage DNA-binding protein4e-0960.1
NC_013768:1260317:126031712603171260640324Listeria monocytogenes 08-5923, complete genomeputative repressor protein8e-0958.9
NC_013766:1293144:129361312936131293936324Listeria monocytogenes 08-5578 chromosome, complete genomeputative repressor protein8e-0958.9
NC_014136:1879049:188141618814161881754339Leuconostoc kimchii IMSNU11154 chromosome, complete genomehypothetical protein2e-0858.2
NC_014551:865254:871752871752872057306Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein1e-0858.2
NC_008555:1204000:120970212097021210175474Listeria welshimeri serovar 6b str. SLCC5334, complete genomephage associated repressor, putative1e-0858.2
NC_002662:30922:436894368944075387Lactococcus lactis subsp. lactis Il1403, complete genomeprophage ps1 protein 152e-0857.4
NC_009332:653474:656458656458656808351Streptococcus pyogenes str. Manfredo chromosome, complete genomeDNA-binding phage protein3e-0857.4
NC_012984:1027898:102789810278981028224327Lactobacillus plantarum JDM1, complete genometranscription regulator6e-0856.2
NC_014554:1821320:183409318340931834419327Lactobacillus plantarum subsp. plantarum ST-III chromosome,transcription regulator6e-0856.2
NC_003485:296140:296536296536296886351Streptococcus pyogenes MGAS8232, complete genomeputative repressor protein6e-0856.2
NC_004606:1107500:114453911445391144889351Streptococcus pyogenes SSI-1, complete genomeputative repressor protein6e-0856.2
NC_004070:747146:751867751867752256390Streptococcus pyogenes MGAS315, complete genomeputative repressor - phage associated7e-0855.8
NC_010610:755000:763466763466763780315Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-0754.7
NC_014657:2127500:214037221403722140905534Caldicellulosiruptor owensensis OL chromosome, complete genomehelix-turn-helix domain protein2e-0754.7
NC_010999:561914:563195563195563548354Lactobacillus casei, complete genomeRep protein4e-0753.5
NC_008527:2112137:212385221238522124235384Lactococcus lactis subsp. cremoris SK11, complete genomeTranscriptional regulator, xre family5e-0753.1
NC_008525:1013979:102745410274541027801348Pediococcus pentosaceus ATCC 25745, complete genomeTranscriptional regulator, xre family6e-0753.1
NC_017199:31500:355233552335900378Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB28,putative transcriptional regulator9e-0752.4
NC_014964:35862:358623586236251390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein2e-0651.6
NC_010321:35855:358553585536244390Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeXRE family transcriptional regulator2e-0651.6
NC_009495:2479465:252016025201602520594435Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA-binding phage protein3e-0650.8
NC_015958:2174731:218947921894792190027549Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0650.8
NC_008380:2287327:230295523029552303281327Rhizobium leguminosarum bv. viciae 3841, complete genomeputative helix-turn-helix transcriptional regulatory protein3e-0650.8
NC_015589:2878000:287984128798412880455615Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0650.4
NC_008527:1036757:103945210394521039799348Lactococcus lactis subsp. cremoris SK11, complete genomeTranscriptional regulator, xre family4e-0650.1
NC_014964:2272413:229248922924892292878390Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehelix-turn-helix domain-containing protein5e-0649.7
NC_017190:852171:857652857652857879228Bacillus amyloliquefaciens LL3 chromosome, complete genomeHTH-type transcriptional regulator yobD5e-0649.7
NC_015977:3011177:302804130280413028793753Roseburia hominis A2-183 chromosome, complete genomehypothetical protein6e-0649.7
NC_015558:905227:925182925182925535354Streptococcus parauberis KCTC 11537 chromosome, complete genomeputative repressor - phage associated7e-0649.3
NC_013892:1272448:128399912839991284364366Xenorhabdus bovienii SS-2004 chromosome, complete genomeDNA-binding protein8e-0649.3