Pre_GI: BLASTP Hits

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Query: NC_009512:5166459:5174502 Pseudomonas putida F1, complete genome

Start: 5174502, End: 5175245, Length: 744

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:1885613:192046619204661921209744Pseudomonas putida ND6 chromosome, complete genomehypothetical protein1e-145515
NC_016830:5994494:601844460184446019187744Pseudomonas fluorescens F113 chromosome, complete genomehypothetical protein2e-140497
NC_009778:567000:578739578739579479741Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-97353
NC_003902:1680414:169060716906071691323717Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein1e-62239
NC_012918:1174412:118828211882821189001720Geobacter sp. M21 chromosome, complete genomehypothetical protein1e-47190
NC_008757:151862:151158151158151865708Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completehypothetical protein1e-44180
NC_017075:1869326:187601918760191876645627Rubrivivax gelatinosus IL144, complete genomeOmpA/MotB family outer membrane protein5e-38157
NC_013722:1689125:173393217339321734774843Xanthomonas albilineans, complete genomeprobable xsa-associated protein2e-1892.8
NC_014652:1091610:111388711138871114612726Caldicellulosiruptor hydrothermalis 108 chromosome, completeompa/motb domain protein9e-1684
NC_013731:11605:350823508235750669Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequencehypothetical protein1e-0963.5
NC_002505:1892430:190289819028981903632735Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completechemotaxis protein MotB-related protein1e-0963.5
NC_009457:1444449:145600114560011456735735Vibrio cholerae O395 chromosome 2, complete sequencehypothetical protein1e-0963.5
NC_012578:1838470:185003118500311850765735Vibrio cholerae M66-2 chromosome I, complete sequencechemotaxis protein MotB-like protein1e-0963.5
NC_012582:1976962:198742019874201988154735Vibrio cholerae O395 chromosome chromosome I, complete sequencechemotaxis protein MotB-related protein1e-0963.5
NC_012668:1688500:174387617438761744610735Vibrio cholerae MJ-1236 chromosome 1, complete sequencechemotaxis protein MotB-related protein1e-0963.5
NC_016445:1363831:137429813742981375032735Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completechemotaxis protein MotB-related protein1e-0963.5
NC_016944:1937645:194920619492061949940735Vibrio cholerae IEC224 chromosome I, complete sequencechemotaxis protein MotB-likeprotein1e-0963.5
NC_007645:3756654:376473437647343765525792Hahella chejuensis KCTC 2396, complete genomeFlagellar motor protein5e-0651.6