Pre_GI: BLASTP Hits

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Query: NC_009512:3068495:3077647 Pseudomonas putida F1, complete genome

Start: 3077647, End: 3078396, Length: 750

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:3965947:396900539690053969781777Pseudomonas fluorescens Pf-5, complete genomeThiJ/PfpI family protein6e-119426
NC_011001:2327633:234700123470012347807807Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative exported Pfp1 family protein2e-82305
NC_011001:2327633:233612423361242336807684Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative Pfp1 family protein3e-56218
NC_010125:74904:976979769798380684Gluconacetobacter diazotrophicus PAl 5, complete genomeputative DJ-1/PfpI family3e-53208
NC_015161:792955:804304804304804990687Deinococcus proteolyticus MRP chromosome, complete genomeThiJ/PfpI domain-containing protein2e-51202
NC_017904:2641270:265840626584062659095690Mycobacterium sp. MOTT36Y chromosome, complete genomethiJ/PfpI family protein9e-51200
NC_008343:88184:9947799477100166690Granulibacter bethesdensis CGDNIH1, complete genomeThiJ/PfpI family protein4e-50198
NC_020450:1254849:127006112700611270738678Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeintracellular protease/amidase7e-48190
NC_008595:1951887:196794619679461968632687Mycobacterium avium 104, complete genomeThiJ/PfpI family protein6e-45181
NC_013421:801542:820907820907821671765Pectobacterium wasabiae WPP163, complete genomeThiJ/PfpI domain protein1e-44179
NC_006055:456711:470174470174470854681Mesoplasma florum L1, complete genomeputative PFPI-like cystiene protease5e-42171
NC_010552:58294:919469194692659714Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein3e-42171
NC_010125:2884762:293446229344622935244783Gluconacetobacter diazotrophicus PAl 5, complete genomeputative intracellular protease/amidase8e-42170
NC_008391:2045348:205124420512442051957714Burkholderia cepacia AMMD chromosome 2, complete sequenceThiJ/PfpI domain protein9e-42170
NC_017047:2079368:208722620872262087930705Rahnella aquatilis HX2 chromosome, complete genomeThiJ/PfpI domain-containing protein1e-37156
NC_014623:8763551:876860487686048769299696Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein4e-37154
NC_009092:3682413:368607036860703686741672Shewanella loihica PV-4, complete genomeThiJ/PfpI domain protein4e-37154
NC_016026:2082500:208712720871272087843717Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeDJ-1/PfpI family protein1e-36153
NC_006138:2630338:263522426352242635919696Desulfotalea psychrophila LSv54, complete genomesimilar to NonF protein1e-36153
NC_013173:1259898:128897412889741289657684Desulfomicrobium baculatum DSM 4028, complete genomeThiJ/PfpI domain protein9e-37153
NC_020181:1317647:133497513349751335655681Enterobacter aerogenes EA1509E, complete genomeThiJ/PfpI family protein4e-36151
NC_014307:2735934:275274827527482753437690Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein5e-36151
NC_020207:1872000:188022318802231880906684Enterococcus faecium NRRL B-2354, complete genomeThiJ, PfpI family protein2e-35149
NC_008319:962968:976220976220976912693Synechococcus sp. CC9311, complete genomePredicted intracellular protease/amidase, ThiJ/PfpL family protein2e-34145
NC_010552:1212000:122589912258991226585687Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein3e-32138
NC_015376:3320818:333425833342583334935678Burkholderia gladioli BSR3 chromosome chromosome 2, completeNonF-related protein3e-32138
NC_007912:4364215:4377415437741543785151101Saccharophagus degradans 2-40, complete genomeintracellular protease/amidase-like1e-31136
NC_015138:693865:699260699260699952693Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeThiJ/PfpI domain-containing protein1e-31136
NC_020453:7826358:785114778511477851818672Agromonas oligotrophica S58 DNA, complete genomeputative intracellular protease/amidase7e-30130
NC_021066:1778000:177972217797221780213492Raoultella ornithinolytica B6, complete genomehypothetical protein9e-26117
NC_013222:1659619:1683289168328916844071119Robiginitalea biformata HTCC2501, complete genomeDJ-1/PfpI family protein8e-26117
NC_015312:848403:866992866992867717726Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeThiJ/PfpI domain-containing protein3e-25115
NC_021177:7815791:782297778229777823678702Streptomyces fulvissimus DSM 40593, complete genomeThiJ/PfpI domain-containing protein1e-24113
NC_006361:1720031:174025417402541740949696Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-24113
NC_013169:2423863:242806424280642428795732Kytococcus sedentarius DSM 20547, complete genomeputative intracellular protease/amidase3e-1892.4
NC_015312:848403:8657128657128667311020Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeThiJ/PfpI domain-containing protein2e-1685.9
NC_008541:2037793:205126020512602051961702Arthrobacter sp. FB24 chromosome 1, complete sequenceThiJ/PfpI domain protein1e-1584
NC_010125:2813653:282770028277002828578879Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator2e-1479.7
NC_016109:954538:972342972342973052711Kitasatospora setae KM-6054, complete genomehypothetical protein2e-1479.3
NC_010552:58294:926819268193523843Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceThiJ/PfpI domain protein5e-1478.2
NC_008391:2045348:205197920519792052821843Burkholderia cepacia AMMD chromosome 2, complete sequenceThiJ/PfpI domain protein7e-1477.4
NC_015947:1877887:189239018923901893229840Burkholderia sp. JV3 chromosome, complete genomeThiJ/PfpI domain-containing protein1e-1377
NC_010943:2091199:210474421047442105583840Stenotrophomonas maltophilia K279a, complete genomeputative ThiJ/PfpI family protein2e-1375.9
NC_007492:2771021:278835227883522789191840Pseudomonas fluorescens PfO-1, complete genomeThiJ/PfpI7e-1374.3
NC_011071:1877500:189201218920121892851840Stenotrophomonas maltophilia R551-3, complete genomeThiJ/PfpI domain protein1e-1273.6
NC_013222:1659619:167914616791461679919774Robiginitalea biformata HTCC2501, complete genomeDJ-1/PfpI family protein4e-1272
NC_014100:2782000:278520327852032786000798Caulobacter segnis ATCC 21756 chromosome, complete genomeThiJ/PfpI domain-containing protein2e-0755.8