Pre_GI: BLASTP Hits

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Query: NC_009512:2108686:2130002 Pseudomonas putida F1, complete genome

Start: 2130002, End: 2130688, Length: 687

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:2963548:297205929720592972745687Pseudomonas putida S16 chromosome, complete genomeisochorismatase superfamily hydrolase7e-128456
NC_015723:280368:301931301931302617687Cupriavidus necator N-1 chromosome 2, complete sequenceisochorismatase hydrolase2e-108391
NC_015723:1486000:152937615293761530074699Cupriavidus necator N-1 chromosome 2, complete sequencehydrolase3e-105381
NC_015723:280368:289562289562290260699Cupriavidus necator N-1 chromosome 2, complete sequencehydrolase5e-104376
NC_015566:3269469:329123232912323291918687Serratia sp. AS12 chromosome, complete genomeisochorismatase hydrolase8e-103372
NC_008781:1426285:142886014288601429510651Polaromonas naphthalenivorans CJ2, complete genomeisochorismatase hydrolase4e-74277
UCMB5137:2418403:242639824263982427042645Bacillus atrophaeus UCMB-5137hypothetical protein3e-73274
NC_014973:3290545:331596733159673316620654Geobacter sp. M18 chromosome, complete genomeisochorismatase hydrolase3e-69261
NC_018750:7540450:755800375580037558998996Streptomyces venezuelae ATCC 10712, complete genomeIsochorismatase family protein2e-65248
NC_014931:1044313:106567010656701066323654Variovorax paradoxus EPS chromosome, complete genomeisochorismatase hydrolase2e-47188
NC_016514:1183356:118644511864451187092648Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YcaC4e-47187
NC_016631:2583762:258376225837622584391630Granulicella mallensis MP5ACTX8 chromosome, complete genomeisochorismatase hydrolase8e-47186
NC_007412:110698:126992126992127657666Anabaena variabilis ATCC 29413 plasmid C, complete sequenceIsochorismatase hydrolase1e-46186
NC_020064:3998715:400748340074834008136654Serratia marcescens FGI94, complete genomenicotinamidase-like amidase1e-44179
NC_015723:1486000:152861215286121529238627Cupriavidus necator N-1 chromosome 2, complete sequenceisochorismatase hydrolase1e-44179
NC_017030:2728175:273379827337982734463666Corallococcus coralloides DSM 2259 chromosome, complete genomeisochorismatase hydrolase4e-43174
NC_016626:1699500:171702817170281717666639Burkholderia sp. YI23 plasmid byi_1p, complete sequenceisochorismatase hydrolase7e-37153
NC_009464:1531847:155135615513561552075720Uncultured methanogenic archaeon RC-I, complete genomehydrolase (isochorismatase family)2e-36152
NC_016830:3697173:370889737088973709544648Pseudomonas fluorescens F113 chromosome, complete genomeIsochorismatase family7e-31134
NC_015379:3175500:318854831885483189186639Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative hydrolase, isochorismatase family1e-30133
NC_015428:193817:207004207004207621618Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeisochorismatase hydrolase1e-28126
NC_011386:1727203:172926117292611729947687Oligotropha carboxidovorans OM5, complete genomeisochorismatase hydrolase3e-28125
NC_002939:2844240:284601428460142846646633Geobacter sulfurreducens PCA, complete genomeisochorismatase family protein5e-27120
NC_014618:2788533:279281727928172793440624Enterobacter cloacae SCF1 chromosome, complete genomeisochorismatase hydrolase9e-27120
NC_007492:2629350:264970926497092650341633Pseudomonas fluorescens PfO-1, complete genomeIsochorismatase hydrolase9e-27120
CP002207:2452286:246101824610182461662645Bacillus atrophaeus 1942, complete genomeisochorismatase family protein7e-26117
UCMB5137:2418403:242717224271722427816645Bacillus atrophaeus UCMB-5137isochorismatase family protein7e-26117
NC_014639:2452286:246101824610182461662645Bacillus atrophaeus 1942 chromosome, complete genomeisochorismatase family protein7e-26117
NC_014019:3543389:354561135456113546255645Bacillus megaterium QM B1551 chromosome, complete genomeisochorismatase family protein6e-26117
NC_011832:913994:931034931034931708675Candidatus Methanosphaerula palustris E1-9c, complete genomeisochorismatase hydrolase7e-22103
NC_010505:4990472:499338649933864994009624Methylobacterium radiotolerans JCM 2831, complete genomeisochorismatase hydrolase4e-21101
NC_005966:2653945:266983626698362670441606Acinetobacter sp. ADP1, complete genomeputative hydrolase1e-20100
NC_020829:940692:983201983201983788588Pseudomonas denitrificans ATCC 13867, complete genomeisochorismatase hydrolase1e-2099.8
NC_010804:1334581:135000513500051350685681Burkholderia multivorans ATCC 17616 chromosome 1, completeYcaC-related amidohydrolase5e-2097.8
NC_010084:2171881:217408821740882174768681Burkholderia multivorans ATCC 17616 chromosome 1, completeisochorismatase hydrolase5e-2097.8
NC_014100:449541:473075473075473755681Caulobacter segnis ATCC 21756 chromosome, complete genomeisochorismatase hydrolase2e-1995.5
NC_015727:1357095:137110813711081371692585Cupriavidus necator N-1 plasmid BB1p, complete sequenceisochorismatase hydrolase3e-1995.1
NC_015726:2177783:218348721834872184074588Cupriavidus necator N-1 chromosome 1, complete sequenceisochorismatase hydrolase5e-1994.4
NC_007626:3393940:343237634323763433080705Magnetospirillum magneticum AMB-1, complete genomeAmidase related to nicotinamidase8e-1890.5
NC_007626:3522265:358796935879693588637669Magnetospirillum magneticum AMB-1, complete genomeAmidase related to nicotinamidase5e-1787.8
NC_014639:2452286:246066024606602460899240Bacillus atrophaeus 1942 chromosome, complete genomeisochorismatase family protein7e-1787.4
CP002207:2452286:246066024606602460899240Bacillus atrophaeus 1942, complete genomeisochorismatase family protein7e-1787.4
NC_011149:3863913:388433338843333885013681Salmonella enterica subsp. enterica serovar Agona str. SL483,SlsA1e-1687
NC_003198:3881221:388837038883703889050681Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein1e-1687
NC_016832:3858815:386265738626573863337681Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Isochorismatase hydrolase1e-1687
NC_016860:3964000:398273539827353983415681Salmonella enterica subsp. enterica serovar Typhimurium strSlsA1e-1687
NC_016863:3905875:392113839211383921818681Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein1e-1687
NC_014121:2629075:264957926495792650256678Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeisochorismatase hydrolase9e-1787
NC_015968:1709680:170968017096801710357678Enterobacter asburiae LF7a chromosome, complete genomeisochorismatase hydrolase4e-1684.7
NC_015663:3466471:349592534959253496602678Enterobacter aerogenes KCTC 2190 chromosome, complete genomeisochorismatase hydrolase6e-1684.3
NC_011146:2916223:292605929260592926664606Geobacter bemidjiensis Bem, complete genomeisochorismatase hydrolase1e-1583.6
NC_011901:491783:513527513527514090564Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeisochorismatase hydrolase2e-1376.3
NC_016002:1938749:195159919515991952120522Pseudogulbenkiania sp. NH8B, complete genomeisochorismatase hydrolase2e-1376.3
NC_009921:6447151:646661064666106467296687Frankia sp. EAN1pec, complete genomeisochorismatase hydrolase6e-1374.3
NC_013959:2801557:282271328227132823279567Sideroxydans lithotrophicus ES-1 chromosome, complete genomeisochorismatase hydrolase6e-1270.9
NC_012125:3879917:389319338931933893762570Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-1168.9
NC_012559:2752825:276478727647872765692906Laribacter hongkongensis HLHK9, complete genomeProbable hydrolase, isochorismatase family5e-1064.7
NC_011666:1601983:161942716194271619993567Methylocella silvestris BL2, complete genomeisochorismatase hydrolase7e-0960.8
NC_012108:4907430:492829049282904928847558Desulfobacterium autotrophicum HRM2, complete genomeputative amidase2e-0859.7
NC_011757:39881:690366903669449414Methylobacterium chloromethanicum CM4, complete genomeisochorismatase hydrolase2e-0756.2
NC_016830:4295831:431766543176654318219555Pseudomonas fluorescens F113 chromosome, complete genomeisochorismatase hydrolase3e-0755.5
NC_012583:361241:390235390235390774540Vibrio cholerae O395 chromosome chromosome II, complete sequenceIsochorismatase hydrolase5e-0754.7
NC_009456:787322:873168873168873707540Vibrio cholerae O395 chromosome 1, complete sequenceisochorismatase family protein5e-0754.7
NC_006138:1921424:193475619347561935352597Desulfotalea psychrophila LSv54, complete genomehypothetical protein1e-0653.5
NC_014307:2735934:274913727491372749670534Ralstonia solanacearum CFBP2957 chromosome, complete genomeisochorismatase-like hydrolases2e-0652.8
NC_010424:448865:457006457006457557552Candidatus Desulforudis audaxviator MP104C, complete genomeisochorismatase hydrolase4e-0651.6