Pre_GI: BLASTP Hits

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Query: NC_009512:1518113:1549835 Pseudomonas putida F1, complete genome

Start: 1549835, End: 1550113, Length: 279

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:195347:209336209336209620285Pseudomonas fluorescens Pf-5, complete genomeProtein of unknown function (DUF497) superfamily1e-28124
NC_014355:2321957:232371623237162324006291Candidatus Nitrospira defluvii, complete genomehypothetical protein5e-1683.2
NC_011726:3205278:322844532284453228723279Cyanothece sp. PCC 8801, complete genomeprotein of unknown function DUF4978e-1372.4
NC_011205:4761598:477517347751734775460288Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein4e-1270.1
NC_011274:4577402:459111745911174591404288Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-1270.1
NC_011294:4604283:461786646178664618153288Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein4e-1270.1
NC_016831:4556761:457047645704764570763288Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1270.1
NC_019940:3518670:353615035361503536419270Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein2e-1167.4
NC_011761:2131911:216171721617172161998282Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein2e-1064.3
NC_011206:2040000:204975920497592050040282Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF4972e-1064.3
NC_009523:1025556:103423010342301034526297Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein3e-1063.9
NC_009483:936000:940304940304940570267Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein5e-1063.2
NC_014364:4488875:450318745031874503441255Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF4977e-1062.8
NC_014216:2127370:214369421436942143954261Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeprotein of unknown function DUF4972e-0961.2
NC_019940:866969:872795872795873088294Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein2e-0960.8
NC_014364:2322269:235259123525912352845255Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF4972e-0960.8
NC_011206:1264639:127698412769841277265282Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF4975e-0959.7
NC_004556:1178897:120040612004061200672267Xylella fastidiosa Temecula1, complete genomehypothetical protein1e-0858.2
NC_010577:1188438:120994612099461210212267Xylella fastidiosa M23, complete genomeprotein of unknown function DUF4971e-0858.2
NC_013960:1258000:126373412637341264015282Nitrosococcus halophilus Nc4 chromosome, complete genomeprotein of unknown function DUF4972e-0857.8
NC_011729:3955310:396396539639653964270306Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein2e-0857.8
NC_013960:1258000:126465312646531264946294Nitrosococcus halophilus Nc4 chromosome, complete genomeprotein of unknown function DUF4975e-0856.6
NC_010645:1496816:151532915153291515595267Bordetella avium 197N, complete genomephage protein5e-0856.6
NC_018012:1326553:133548113354811335753273Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein5e-0856.2
NC_015581:1043394:105092910509291051207279Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein1e-0755.1
NC_008751:1762562:178359817835981783867270Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeprotein of unknown function DUF4973e-0753.9
NC_002506:324552:333953333953334219267Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein4e-0753.5
NC_012580:353273:362410362410362676267Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein4e-0753.5
NC_016446:49618:590185901859284267Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehypothetical protein4e-0753.5
NC_016945:324519:333921333921334187267Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein4e-0753.5
NC_005125:1161000:118985711898571190162306Gloeobacter violaceus PCC 7421, complete genomehypothetical protein3e-0753.5
NC_012560:3282704:329640632964063296675270Azotobacter vinelandii DJ, complete genomehypothetical protein4e-0753.1
NC_021150:3282702:329640432964043296673270Azotobacter vinelandii CA6, complete genomehypothetical protein4e-0753.1
NC_013173:2884887:288712728871272887390264Desulfomicrobium baculatum DSM 4028, complete genomeprotein of unknown function DUF4972e-0651.2
NC_007494:739403:743884743884744174291Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein3e-0650.4
NC_015224:2095816:209556320955632095835273Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein6e-0649.3
NC_010816:1319921:132221613222161322488273Bifidobacterium longum DJO10A, complete genomehypothetical protein7e-0649.3
NC_007650:1192310:121619712161971216466270Burkholderia thailandensis E264 chromosome II, complete sequencepANL568e-0649.3