Pre_GI: BLASTP Hits

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Query: NC_009512:1025365:1029482 Pseudomonas putida F1, complete genome

Start: 1029482, End: 1029823, Length: 342

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017223:3345902:334761233476123347953342Bordetella pertussis CS chromosome, complete genomehypothetical protein3e-23107
NC_002929:3305682:330739233073923307733342Bordetella pertussis Tohama I, complete genomehypothetical protein3e-23107
NC_015733:2581324:260396926039692604319351Pseudomonas putida S16 chromosome, complete genomehypothetical protein2e-22103
NC_009439:3485000:350329935032993503646348Pseudomonas mendocina ymp, complete genomeprotein of unknown function DUF861, cupin_32e-1581.3
NC_008542:1021848:104066910406691041013345Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceprotein of unknown function DUF861, cupin_33e-1373.9
NC_008060:476861:496022496022496366345Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceprotein of unknown function DUF861, cupin_33e-1373.9
NC_010508:981377:993912993912994256345Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceprotein of unknown function DUF861 cupin_33e-1373.9
NC_011000:3362382:336701833670183367362345Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein3e-1373.6
NC_007510:943068:955131955131955475345Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF8611e-1272
NC_008027:713500:727726727726728070345Pseudomonas entomophila L48, complete genomehypothetical protein7e-1269.3
NC_015424:1689500:172255517225551722923369Aeromonas veronii B565 chromosome, complete genometranscriptional regulator2e-0857.8
NC_016625:171341:200160200160200510351Burkholderia sp. YI23 chromosome 2, complete sequencehypothetical protein4e-0856.6
NC_017986:2548720:255319625531962553591396Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-0753.9
NC_008609:142471:184584184584184859276Pelobacter propionicus DSM 2379, complete genomeprotein of unknown function DUF861, cupin_31e-0651.6
NC_011894:983572:988110988110988460351Methylobacterium nodulans ORS 2060, complete genomeprotein of unknown function DUF861 cupin_33e-0650.4