Pre_GI: BLASTP Hits

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Query: NC_009480:99640:128542 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 128542, End: 129288, Length: 747

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013929:8525000:853867185386718539318648Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-68258
NC_013929:2583849:258533825853382585931594Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator5e-32137
NC_013093:5791961:581324958132495813830582Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family2e-31135
NC_009921:3666898:370507837050783705695618Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family5e-27121
NC_009921:3666898:373621137362113736819609Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family7e-24110
NC_009664:4423829:445172844517284452351624Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family7e-1890.9
NC_009921:522000:551311551311551880570Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-1686.7
NC_009921:5275694:529173252917325292325594Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family5e-1684.7
NC_005773:866157:882507882507883145639Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, TetR family1e-1583.6
NC_017221:495088:514700514700515314615Bifidobacterium longum subsp. longum KACC 91563 chromosome,transcriptional regulator6e-1581.3
NC_017219:711431:711431711431712018588Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transcriptional regulator7e-1580.9
NC_009921:5275694:529638452963845297010627Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family3e-1375.5
NC_015389:1858732:187731018773101877954645Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, TetR family1e-1273.6
NC_008618:1487000:149429714942971494932636Bifidobacterium adolescentis ATCC 15703, complete genomepossible TetR-type transcriptional regulator3e-1065.5
NC_014246:611275:636808636808637455648Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTetR family transcriptional regulator9e-0960.5
NC_017221:495088:496425496425497156732Bifidobacterium longum subsp. longum KACC 91563 chromosome,AcrR family transcriptional regulator1e-0757
NC_013510:3117837:314603831460383146595558Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family3e-0755.8
NC_008618:1487000:150279615027961503530735Bifidobacterium adolescentis ATCC 15703, complete genomepossible TetR-type transcriptional regulator3e-0755.8
NC_017075:1674758:169781216978121698459648Rubrivivax gelatinosus IL144, complete genomeTetR family transcriptional regulator3e-0755.5
NC_021171:608315:629304629304629975672Bacillus sp. 1NLA3E, complete genomeTetR family transcriptional regulator4e-0755.1
NC_017986:4790482:483635748363574836962606Pseudomonas putida ND6 chromosome, complete genomeTetR family transcriptional regulator5e-0755.1
NC_009512:2108686:213674621367462137351606Pseudomonas putida F1, complete genometranscriptional regulator, TetR family5e-0755.1
NC_012912:2426520:243471224347122435335624Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family6e-0754.7
NC_014152:191200:203522203522204064543Thermincola sp. JR, complete genometranscriptional regulator, TetR family9e-0753.9
NC_009668:1591290:159361715936171594213597Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceTetR family transcriptional regulator2e-0653.1
NC_014831:1818968:182454118245411825230690Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family2e-0653.1
NC_014915:3320768:336686733668673367790924Geobacillus sp. Y412MC52 chromosome, complete genomeregulatory protein TetR2e-0653.1
NC_010694:1966676:196889219688921969524633Erwinia tasmaniensis, complete genomeTetR-family transcriptional regulator2e-0653.1
NC_014500:2402881:242317224231722423798627Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding transcriptional regulatory family of the TetR family2e-0652.8
NC_009921:3666898:367405936740593674655597Frankia sp. EAN1pec, complete genomehypothetical protein2e-0652.8
NC_006361:714944:724533724533725093561Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator2e-0652.8
NC_015389:905165:924633924633925349717Coriobacterium glomerans PW2 chromosome, complete genomeregulatory protein TetR5e-0651.6
NC_014168:869746:906042906042906671630Segniliparus rotundus DSM 44985 chromosome, complete genomeTetR family transcriptional regulator6e-0651.2
NC_014158:1651326:166301016630101663705696Tsukamurella paurometabola DSM 20162 chromosome, complete genometranscriptional regulator, TetR family7e-0651.2