Pre_GI: BLASTP Hits

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Query: NC_009480:99640:113031 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 113031, End: 114005, Length: 975

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009480:31412:503765037651356981Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative extracellular serine protease9e-71267
NC_009480:31412:5388353883548961014Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeconserved hypothetical protein, putative extracellular serine protease7e-42171
NC_006087:765081:7752527752527762771026Leifsonia xyli subsp. xyli str. CTCB07, complete genomesecreted protein1e-1687.8
NC_014550:2091797:2095704209570420967111008Arthrobacter arilaitensis Re117, complete genomehypothetical protein1e-1687.4
NC_010399:13222:259732597326446474Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completehypothetical protein2e-1583.2
NC_010399:13222:264242642426897474Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completehypothetical protein2e-1480.5
NC_013510:1295439:1306554130655413076511098Thermomonospora curvata DSM 43183, complete genomehypothetical protein4e-1272.4
NC_009480:99640:103428103428104384957Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein7e-1065.1
NC_013595:9149273:9155146915514691563241179Streptosporangium roseum DSM 43021, complete genomehypothetical protein4e-0962.4
NC_015731:313676:3265523265523277301179Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein3e-0859.3
NC_013595:9149273:9151051915105191521661116Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-0757
NC_009480:31412:5150351503525071005Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeconserved hypothetical protein, putative extracellular serine protease3e-0756.6
NC_009480:31412:6788567885688861002Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeconserved hypothetical protein, putative extracellular protease3e-0756.2
NC_013510:675368:694003694003694926924Thermomonospora curvata DSM 43183, complete genomehypothetical protein8e-0754.7
NC_013510:2782240:279295327929532793909957Thermomonospora curvata DSM 43183, complete genomehypothetical protein1e-0654.3
NC_013595:9149273:9156471915647191575351065Streptosporangium roseum DSM 43021, complete genomehypothetical protein1e-0654.3
NC_013595:9149273:9153382915338291549381557Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-0652.8
NC_014616:1415951:1421187142118714222751089Bifidobacterium bifidum S17 chromosome, complete genomeserine/cysteine peptidase8e-0651.6