Pre_GI: BLASTP Hits

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Query: NC_009480:739395:751420 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 751420, End: 751908, Length: 489

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014550:2091797:211753021175302118036507Arthrobacter arilaitensis Re117, complete genomeputative redox-sensitive transcriptional regulator SoxR1e-38158
NC_002927:4392768:441490944149094415373465Bordetella bronchiseptica RB50, complete genomeputative MerR-family transcriptional regulator7e-32136
NC_008314:2611873:262853026285302629084555Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, SoxR-family3e-31134
NC_019673:7598026:761095576109557611416462Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, MerR family1e-27122
NC_020181:3585898:360470636047063605164459Enterobacter aerogenes EA1509E, complete genomeRedox-sensitive transcriptional activator SoxR2e-27121
NC_014210:2372813:239050823905082390975468Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, MerR family1e-26119
NC_006905:4405301:443899744389974439455459Salmonella enterica subsp. enterica serovar Choleraesuis strredox-sensing transcriptional activator SoxR, contains iron-sulfur center for redox-sensing (MerR family)3e-26117
NC_011094:4361238:439494043949404395398459Salmonella enterica subsp. enterica serovar Schwarzengrund strredox-sensitive transcriptional activator SoxR3e-26117
NC_010067:3310336:331693133169313317389459Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-26116
NC_016111:5369414:537814953781495378634486Streptomyces cattleya NRRL 8057, complete genomeHTH-type transcriptional activator soxR-like protein1e-25115
NC_014153:2125551:212955021295502130035486Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, MerR family3e-22104
NC_020911:3475096:347754534775453477955411Octadecabacter antarcticus 307, complete genomeputative HTH-type transcriptional regulator8e-1062.8
NC_008782:2857899:286344128634412863956516Acidovorax sp. JS42, complete genomeputative transcriptional regulator, MerR family7e-0856.6
NC_015422:2858228:286535728653572865800444Alicycliphilus denitrificans K601 chromosome, complete genomeMerR family transcriptional regulator7e-0856.6
NC_018697:1343756:136580113658011366259459Cycloclasticus sp. P1 chromosome, complete genometranscriptional regulator1e-0755.8
NC_013510:810525:8258188258188271671350Thermomonospora curvata DSM 43183, complete genomealdo/keto reductase2e-0754.7
NC_008750:1253354:126126912612691261733465Shewanella sp. W3-18-1, complete genomeputative transcriptional regulator, MerR family3e-0754.3
NC_016113:994469:100038710003871000770384Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceMerR family transcriptional regulator4e-0753.9
NC_014831:1906691:193368319336831934192510Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, MerR family5e-0753.5
NC_016114:648422:652656652656653057402Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeMerR family transcriptional regulator5e-0753.5
NC_013166:82986:944679446794919453Kangiella koreensis DSM 16069, complete genometranscriptional regulator, MerR family6e-0753.5
NC_014210:144036:146517146517146933417Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, MerR family7e-0753.1
NC_003296:140889:159311159311159769459Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN9e-0752.8
NC_016109:4088259:410598841059884106383396Kitasatospora setae KM-6054, complete genomeputative MerR family transcriptional regulator2e-0652
NC_016002:3077648:309856230985623098969408Pseudogulbenkiania sp. NH8B, complete genomeMerR family transcriptional regulator2e-0651.6
NC_009668:529175:531374531374531790417Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceMerR family transcriptional regulator2e-0651.2
NC_008702:2892605:289957428995742900011438Azoarcus sp. BH72, complete genomeprobable redox-sensitive transcriptional activator3e-0651.2
NC_013159:3858425:387858238785823879541960Saccharomonospora viridis DSM 43017, complete genomepredicted transcriptional regulator4e-0650.8
NC_013446:2820000:282079828207982821217420Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MerR family5e-0650.4
NC_003888:3111998:312967031296703130077408Streptomyces coelicolor A3(2), complete genomeMerR-family transcriptional regulator6e-0650.1
NC_009425:63709:883968839688821426Enterobacter sp. 638 plasmid pENTE01, complete sequenceMerR family transcriptional regulator1e-0549.3