Pre_GI: BLASTP Hits

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Query: NC_009456:998935:1014490 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 1014490, End: 1014963, Length: 474

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:242760:246006246006246479474Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein6e-77285
NC_013892:992811:101355910135591014104546Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-22103
NC_016602:2586044:260030526003052600841537Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein4e-1993.6
NC_008751:1736512:174917317491731749733561Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomenucleoid DNA-binding protein2e-1891.7
NC_009654:615504:631972631972632511540Marinomonas sp. MWYL1, complete genomehypothetical protein7e-1579.7
NC_011883:303980:304942304942305478537Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,nucleoid DNA-binding protein2e-1478.2
NC_004578:4499143:451702845170284517564537Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-0753.9