Pre_GI: BLASTP Hits

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Query: NC_009456:557962:567932 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 567932, End: 568312, Length: 381

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012667:839318:851509851509851820312Vibrio cholerae MJ-1236 chromosome 2, complete genometranslation initiation factor Sui14e-39159
NC_012583:683887:695699695699696010312Vibrio cholerae O395 chromosome chromosome II, complete sequenceSui1 family protein4e-39159
NC_016628:193000:214859214859215170312Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceTranslation initiation factor 13e-31133
NC_005140:883857:889161889161889472312Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein8e-29125
NC_013457:140474:162597162597162908312Vibrio sp. Ex25 chromosome 2, complete genometranslation initiation factor SUI1-related protein1e-28125
NC_020063:2480983:250461025046102504936327Enterobacteriaceae bacterium strain FGI 57, complete genometranslation initiation factor 1 (eIF-1/SUI1)9e-24108
NC_007954:3171081:320778632077863208151366Shewanella denitrificans OS217, complete genometranslation initiation factor SUI11e-23108
NC_009092:1305355:132109213210921321421330Shewanella loihica PV-4, complete genometranslation initiation factor SUI14e-2096.7
NC_011146:482440:489753489753490121369Geobacter bemidjiensis Bem, complete genometranslation initiation factor SUI15e-1476.6
NC_007517:3151742:316885231688523169217366Geobacter metallireducens GS-15, complete genomehypothetical protein3e-1373.6
NC_015424:2726223:272622327262232726552330Aeromonas veronii B565 chromosome, complete genometranslation initiation factor, Sui1 family-like protein1e-1272
NC_014973:4630132:464869246486924648997306Geobacter sp. M18 chromosome, complete genometranslation initiation factor SUI15e-1166.2
NC_009434:1068281:108189810818981082269372Pseudomonas stutzeri A1501, complete genometranslation initiation factor SUI12e-1064.7
NC_015740:926920:940686940686941057372Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetranslation initiation factor SUI12e-1064.7
NC_006576:2073163:209011620901162090562447Synechococcus elongatus PCC 6301, complete genomehypothetical protein4e-0753.5
NC_007604:2213659:222646822264682226803336Synechococcus elongatus PCC 7942, complete genomeprobable translation initiation factor SUI17e-0752.8