Pre_GI: BLASTP Hits

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Query: NC_009439:574437:595567 Pseudomonas mendocina ymp, complete genome

Start: 595567, End: 596634, Length: 1068

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:636667:6587116587116597751065Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeuroporphyrinogen decarboxylase0672
NC_009434:608765:6318416318416329441104Pseudomonas stutzeri A1501, complete genomeuroporphyrinogen decarboxylase0671
NC_013851:3478153:3478153347815334792171065Allochromatium vinosum DSM 180 chromosome, complete genomeuroporphyrinogen decarboxylase1e-148526
NC_004603:3080614:3104302310430231053691068Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeuroporphyrinogen decarboxylase9e-143506
NC_015572:427732:4516824516824527521071Methylomonas methanica MC09 chromosome, complete genomeUroporphyrinogen decarboxylase3e-140498
NC_009465:938378:9704149704149714511038Candidatus Vesicomyosocius okutanii HA, complete genomeuroporphyrinogen decarboxylase2e-116418
NC_014147:1200984:1214293121429312153691077Moraxella catarrhalis RH4 chromosome, complete genomeuroporphyrinogen decarboxylase8e-110397
NC_019815:679592:6903266903266913571032Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiuroporphyrinogen decarboxylase6e-99360
NC_015914:917124:9241389241389251751038Cyclobacterium marinum DSM 745 chromosome, complete genomeUroporphyrinogen decarboxylase5e-89328
NC_015696:517941:5410265410265420601035Francisella sp. TX077308 chromosome, complete genomeUroporphyrinogen III decarboxylase8e-86317
NC_010336:996661:1019566101956610206001035Francisella philomiragia subsp. philomiragia ATCC 25017, completeUroporphyrinogen decarboxylase5e-85314
NC_006570:24636:4746247462484961035Francisella tularensis subsp. tularensis Schu 4, complete genomeuroporphyrinogen decarboxylase3e-84312
NC_008245:24652:4747847478485121035Francisella tularensis subsp. tularensis FSC 198, complete genomeuroporphyrinogen decarboxylase3e-84312
NC_009257:109528:1323721323721334061035Francisella tularensis subsp. tularensis WY96-3418 chromosome,uroporphyrinogen decarboxylase3e-84312
NC_016933:24654:4748047480485141035Francisella tularensis TIGB03 chromosome, complete genomeUroporphyrinogen III decarboxylase3e-84312
NC_016937:24654:4748047480485141035Francisella tularensis subsp. tularensis TI0902 chromosome,Uroporphyrinogen III decarboxylase3e-84312
NC_008601:1733940:1777836177783617788701035Francisella tularensis subsp. novicida U112, complete genomeuroporphyrinogen decarboxylase2e-84312
NC_008369:1702885:1745967174596717470011035Francisella tularensis subsp. holarctica OSU18, complete genomeuroporphyrinogen decarboxylase1e-83310
NC_007880:1703346:1746337174633717473711035Francisella tularensis subsp. holarctica, complete genomeuroporphyrinogen decarboxylase1e-83310
NC_009749:1699152:1742234174223417432681035Francisella tularensis subsp. holarctica FTA, complete genomeuroporphyrinogen decarboxylase1e-83310
NC_010677:96470:1193111193111203451035Francisella tularensis subsp. mediasiatica FSC147, complete genomeuroporphyrinogen decarboxylase2e-83309
NC_009662:455139:4750074750074760291023Nitratiruptor sp. SB155-2, complete genomeuroporphyrinogen decarboxylase1e-82306
NC_009715:1470419:1494511149451114955391029Campylobacter curvus 525.92 chromosome, complete genomeuroporphyrinogen decarboxylase3e-81302
NC_015177:258504:2811412811412821751035Pedobacter saltans DSM 12145 chromosome, complete genomeuroporphyrinogen decarboxylase3e-80298
NC_014166:2217790:2223931222393122249621032Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeuroporphyrinogen decarboxylase4e-79295
NC_012039:480625:5031365031365041581023Campylobacter lari RM2100, complete genomeuroporphyrinogen decarboxylase3e-78292
NC_009663:1656804:1669150166915016701901041Sulfurovum sp. NBC37-1, complete genomeuroporphyrinogen decarboxylase9e-76283
NC_014836:2581939:2581939258193925829581020Desulfurispirillum indicum S5 chromosome, complete genomeuroporphyrinogen decarboxylase1e-70266
NC_005027:4180502:4180502418050241825232022Rhodopirellula baltica SH 1, complete genomeuroporphyrinogen III synthase, uroporhyrinogen decarboxylase9e-70264
NC_004722:1033000:1052509105250910535551047Bacillus cereus ATCC 14579, complete genomeuroporphyrinogen decarboxylase3e-67256
NC_014171:1043961:1064753106475310657991047Bacillus thuringiensis BMB171 chromosome, complete genomeuroporphyrinogen decarboxylase1e-67256
NC_008600:1071537:1090686109068610917561071Bacillus thuringiensis str. Al Hakam, complete genomeuroporphyrinogen decarboxylase3e-67255
NC_013939:295220:3178023178023188121011Deferribacter desulfuricans SSM1, complete genomeuroporphyrinogen decarboxylase3e-67255
NC_010184:1048559:1067851106785110688971047Bacillus weihenstephanensis KBAB4, complete genomeuroporphyrinogen decarboxylase3e-66252
NC_008699:3896816:3896816389681638978531038Nocardioides sp. JS614, complete genomeuroporphyrinogen decarboxylase8e-66250
NC_009482:822716:8405358405358415931059Synechococcus sp. RCC307 chromosome, complete genomeuroporphyrinogen decarboxylase1e-65249
NC_007622:1842000:1891854189185418928911038Staphylococcus aureus RF122, complete genomeuroporphyrinogen decarboxylase5e-65248
NC_015658:1:1221712217132331017Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequenceUroporphyrinogen decarboxylase2e-61236
NC_010545:1089286:1093104109310410942251122Corynebacterium urealyticum DSM 7109, complete genomeuroporphyrinogen decarboxylase2e-60232
NC_015722:209722:2159382159382169781041Candidatus Midichloria mitochondrii IricVA chromosome, completeuroporphyrinogen decarboxylase5e-56218
NC_005295:21995:2199521995230021008Ehrlichia ruminantium str. Welgevonden, complete genomeuroporphyrinogen decarboxylase9e-53207
NC_010793:541040:5410405410405420681029Orientia tsutsugamushi str. Ikeda, complete genomeuroporphyrinogen decarboxylase1e-48193
NC_012026:1135041:1151350115135011523901041Anaplasma marginale str. Florida, complete genomeuroporphyrinogen decarboxylase (hemE)6e-46184
NC_014734:3086165:3107952310795231089861035Paludibacter propionicigenes WB4 chromosome, complete genomeuroporphyrinogen decarboxylase4e-45182
NC_013532:85371:9550095500965401041Anaplasma centrale str. Israel, complete genomeuroporphyrinogen decarboxylase3e-45182
NC_000117:845141:8687308687308697401011Chlamydia trachomatis D/UW-3/CX, complete genomeuroporphyrinogen decarboxylase4e-38159
NC_004842:1132441:114714611471461147943798Anaplasma marginale str. St. Maries, complete genomeuroporphyrinogen decarboxylase5e-26119
NC_009975:1712577:1715507171550717165981092Methanococcus maripaludis C6, complete genomeUroporphyrinogen decarboxylase (URO-D)4e-1685.9
NC_016627:2637226:2643875264387526449541080Clostridium clariflavum DSM 19732 chromosome, complete genomeuroporphyrinogen-III decarboxylase1e-1170.9
NC_009614:3714770:3716362371636237173721011Bacteroides vulgatus ATCC 8482 chromosome, complete genomemethylcobamide:CoM methyltransferase mtbA8e-1168.2
NC_014328:3336000:3348460334846033495151056Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeuroporphyrinogen decarboxylase-like protein5e-1065.9
NC_014652:325109:3311543311543322151062Caldicellulosiruptor hydrothermalis 108 chromosome, complete5e-1065.9
NC_007644:2452244:2464683246468324657411059Moorella thermoacetica ATCC 39073, complete genomeUroporphyrinogen decarboxylase (URO-D)6e-1065.5
NC_007644:2452244:2467183246718324682321050Moorella thermoacetica ATCC 39073, complete genomeMethyltransferase MtaA/CmuA2e-0963.9
NC_014720:383587:3896413896413917942154Caldicellulosiruptor kronotskyensis 2002 chromosome, completeuroporphyrinogen decarboxylase (uro-d)2e-0963.5
NC_007644:416000:4285194285194295501032Moorella thermoacetica ATCC 39073, complete genomeUroporphyrinogen decarboxylase (URO-D)2e-0963.5
NC_014657:2283176:2297834229783422988921059Caldicellulosiruptor owensensis OL chromosome, complete genomeuroporphyrinogen decarboxylase (uro-d)2e-0860.1
NC_012658:1617902:1629929162992916309991071Clostridium botulinum Ba4 str. 657 chromosome, complete genomeuroporphyrinogen decarboxylase family protein2e-0757
NC_012658:1617902:1621242162124216222941053Clostridium botulinum Ba4 str. 657 chromosome, complete genomeuroporphyrinogen decarboxylase family protein3e-0756.2