Pre_GI: BLASTP Hits

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Query: NC_009439:4661102:4661102 Pseudomonas mendocina ymp, complete genome

Start: 4661102, End: 4663327, Length: 2226

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020829:5174354:5176574517657451788022229Pseudomonas denitrificans ATCC 13867, complete genomeAsmA family protein0894
NC_011901:3072817:3090105309010530922432139Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeAsmA family protein1e-65251
NC_018868:2935580:2935580293558029376852106Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeAsmA family superfamily protein5e-56219
NC_013889:2603914:2605120260512026073482229Thioalkalivibrio sp. K90mix chromosome, complete genomeAsmA family protein5e-52206
NC_014366:2427968:2447693244769324500172325Gamma proteobacterium HdN1, complete genomeUncharacterized protein involved in outer membrane biogenesis, AsmA family7e-51202
NC_008789:1237969:1238775123877512409732199Halorhodospira halophila SL1, complete genomeAsmA family protein4e-37157
NC_009901:2915939:2937695293769529395331839Shewanella pealeana ATCC 700345, complete genomeAsmA family protein7e-2099.8
NC_016629:3496630:3522986352298635257782793Desulfovibrio africanus str. Walvis Bay chromosome, completeAsmA family protein6e-1893.2
NC_020409:192508:2088412088412120083168Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeputative AsmA family protein2e-1585.1
NC_019940:2236630:2255832225583222581112280Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein3e-1480.9
NC_009832:1719149:1719775171977517216101836Serratia proteamaculans 568, complete genomeAsmA family protein1e-1172
NC_007606:1999870:1999870199987020017231854Shigella dysenteriae Sd197, complete genomesuppressor of ompF assembly mutants3e-1067.8
NC_009800:2156091:2184001218400121858541854Escherichia coli HS, complete genomeAsmA protein3e-1067.8
NC_012779:1286500:1289083128908312908701788Edwardsiella ictaluri 93-146, complete genomeprotein AsmA3e-1067.8
NC_015224:1763848:1763848176384817656951848Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative assembly protein3e-1067.4
NC_007712:1601499:1605112160511216069171806Sodalis glossinidius str. 'morsitans', complete genomeouter membrane assembly protein1e-0965.9
NC_020211:1704500:1705129170512917069611833Serratia marcescens WW4, complete genomeputative assembly protein3e-0964.3
NC_003078:578000:6027866027866044531668Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative protein, similar to protein involved in assembly of outer membrane proteins4e-0964.3
NC_015566:1659288:1662716166271616645481833Serratia sp. AS12 chromosome, complete genomeAsmA family protein4e-0963.9
NC_015567:1660462:1662728166272816645601833Serratia sp. AS9 chromosome, complete genomeAsmA family protein4e-0963.9
NC_017323:689512:7106127106127136353024Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceAsmA family protein3e-0861.2
NC_011283:1690193:1690193169019316920401848Klebsiella pneumoniae 342 chromosome, complete genomeassembly protein5e-0860.1
NC_020064:1547524:1547524154752415493651842Serratia marcescens FGI94, complete genomeuncharacterized protein involved in outer membrane biogenesis6e-0860.1
NC_013850:1658010:1658010165801016598571848Klebsiella variicola At-22 chromosome, complete genomeAsmA family protein9e-0859.7
NC_015596:1511961:1532190153219015352043015Sinorhizobium meliloti AK83 chromosome 2, complete sequenceAsmA family protein2e-0758.5
NC_014500:1491660:1494411149441114962251815Dickeya dadantii 3937 chromosome, complete genomeputative assembly protein2e-0654.7
NC_013508:1289159:1292923129292312947071785Edwardsiella tarda EIB202, complete genomeAsmA family protein3e-0654.3