Pre_GI: BLASTP Hits

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Query: NC_009439:3485000:3503299 Pseudomonas mendocina ymp, complete genome

Start: 3503299, End: 3503646, Length: 348

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008542:1021848:104066910406691041013345Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceprotein of unknown function DUF861, cupin_32e-48190
NC_008060:476861:496022496022496366345Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceprotein of unknown function DUF861, cupin_32e-48190
NC_011000:3362382:336701833670183367362345Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein3e-48190
NC_007510:943068:955131955131955475345Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF8613e-48190
NC_010508:981377:993912993912994256345Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceprotein of unknown function DUF861 cupin_33e-48189
NC_008027:713500:727726727726728070345Pseudomonas entomophila L48, complete genomehypothetical protein4e-48189
NC_009512:1025365:102948210294821029823342Pseudomonas putida F1, complete genomeprotein of unknown function DUF861, cupin_32e-1581.3
NC_015424:1689500:172255517225551722923369Aeromonas veronii B565 chromosome, complete genometranscriptional regulator2e-1064.3
NC_017986:2548720:255319625531962553591396Pseudomonas putida ND6 chromosome, complete genomehypothetical protein5e-1063.2
NC_017223:3345902:334761233476123347953342Bordetella pertussis CS chromosome, complete genomehypothetical protein2e-0961.6
NC_002929:3305682:330739233073923307733342Bordetella pertussis Tohama I, complete genomehypothetical protein2e-0961.6
NC_015733:2581324:260396926039692604319351Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-0858.5
NC_008609:142471:184584184584184859276Pelobacter propionicus DSM 2379, complete genomeprotein of unknown function DUF861, cupin_31e-0755.1