Pre_GI: BLASTP Hits

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Query: NC_009439:1297851:1331351 Pseudomonas mendocina ymp, complete genome

Start: 1331351, End: 1332247, Length: 897

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:2407500:242496524249652425915951Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein7e-137486
NC_011770:2499432:251182825118282512778951Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-133475
NC_010322:5293652:530310353031035304017915Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein1e-130466
NC_018080:2288700:231344923134492314384936Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein8e-125446
NC_007298:1759881:178227817822781783195918Dechloromonas aromatica RCB, complete genomehypothetical protein1e-118426
NC_015381:1588742:160429516042951605215921Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein8e-110396
NC_007651:72952:126762126762127679918Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein5e-108390
NC_009138:1843998:186655718665571867468912Herminiimonas arsenicoxydans, complete genomeConserved hypothetical protein in putative prophage region2e-106385
NC_011000:1262324:130653613065361307450915Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein6e-105380
NC_007969:2885249:288896128889612889869909Psychrobacter cryohalolentis K5, complete genomehypothetical protein3e-104378
NC_011000:2732330:277652227765222777436915Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein7e-104377
NC_007651:3064530:313574331357433136657915Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein4e-103374
NC_015422:3184823:3201430320143032024551026Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein8e-103373
NC_016147:2337244:235527923552792356172894Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein2e-102372
NC_017506:1222000:123448512344851235417933Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein1e-100366
NC_008542:197500:223448223448224398951Burkholderia cenocepacia HI2424 chromosome 1, complete sequencehypothetical protein6e-100363
NC_009076:3564500:360178136017813602713933Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein7e-95347
NC_013446:1648556:1696271169627116973441074Comamonas testosteroni CNB-2, complete genomephage major capsid protein, P2 family4e-93341
NC_017506:1100679:111763811176381118546909Marinobacter adhaerens HP15 chromosome, complete genomehypothetical protein6e-93340
NC_016002:2946702:296490329649032965802900Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein3e-90331
NC_018691:3525430:355780935578093558753945Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein3e-89328
NC_014153:3084356:309787930978793098820942Thiomonas intermedia K12 chromosome, complete genomeputative hydrolase or metal-binding protein7e-83307
NC_012691:2476223:250469325046932505625933Tolumonas auensis DSM 9187, complete genomehypothetical protein3e-81301
NC_015424:3520783:352281435228143523794981Aeromonas veronii B565 chromosome, complete genomehypothetical protein6e-79294
NC_008782:2568027:2601481260148126025721092Acidovorax sp. JS42, complete genomehypothetical protein6e-58224
NC_008570:1143578:118378011837801184619840Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein1e-57223
NC_015942:1711026:172515617251561725674519Acidithiobacillus ferrivorans SS3 chromosome, complete genome1e-41170
NC_020209:3874844:390183339018333902537705Pseudomonas poae RE*1-1-14, complete genomehypothetical protein1e-37157
NC_007950:109399:1227181227181237521035Polaromonas sp. JS666 plasmid 2, complete sequencehypothetical protein1e-34147
NC_007948:1574881:1589776158977615907891014Polaromonas sp. JS666, complete genomehypothetical protein2e-1376.3