Pre_GI: BLASTP Hits

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Query: NC_009381:1783886:1818251 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1818251, End: 1819222, Length: 972

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012669:96966:105626105626106606981Beutenbergia cavernae DSM 12333, complete genomeRibonucleoside-diphosphate reductase3e-148524
NC_015514:3911655:391981239198123920792981Cellulomonas fimi ATCC 484 chromosome, complete genomeribonucleoside-diphosphate reductase1e-147522
NC_015671:3211972:321960232196023220582981Cellvibrio gilvus ATCC 13127 chromosome, complete genomeribonucleoside-diphosphate reductase8e-147520
NC_016642:2440070:246763024676302468580951Pseudovibrio sp. FO-BEG1 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta1e-146519
NC_011886:2369980:237919323791932380167975Arthrobacter chlorophenolicus A6, complete genomeRibonucleoside-diphosphate reductase1e-146519
NC_014151:449732:480015480015480995981Cellulomonas flavigena DSM 20109 chromosome, complete genomeRibonucleoside-diphosphate reductase3e-144511
NC_014550:2013422:202349620234962024470975Arthrobacter arilaitensis Re117, complete genomeribonucleoside-diphosphate reductase subunit beta3e-143508
NC_015588:2468207:248030924803092481289981Isoptericola variabilis 225 chromosome, complete genomeRibonucleoside-diphosphate reductase5e-139493
NC_012803:1117875:113229711322971133268972Micrococcus luteus NCTC 2665, complete genomeribonucleoside-diphosphate reductase class Ib beta subunit1e-132473
NC_016932:1791868:180052018005201801506987Corynebacterium pseudotuberculosis 316 chromosome, complete genomeribonucleoside-diphosphate reductase subunit beta4e-131467
NC_016893:694587:715325715325716302978Wigglesworthia glossinidia endosymbiont of Glossina morsitansferritin-like ribonucleoside-diphosphate reductase 2, beta subunit2e-129462
NC_004344:672550:693847693847694821975Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,ribonucleotide-diphosphate reductase beta subunit4e-125447
NC_015859:952500:975322975322976218897Corynebacterium variabile DSM 44702 chromosome, complete genomeribonucleoside-diphosphate reductase subunit beta2e-117422
NC_014550:3316115:3358652335865233596771026Arthrobacter arilaitensis Re117, complete genomeribonucleoside-diphosphate reductase subunit beta1e-107389
NC_012590:2117027:213742821374282138414987Corynebacterium aurimucosum ATCC 700975, complete genomeribonucleoside-diphosphate reductase beta chain1e-106386
NC_013172:3141739:3155862315586231568871026Brachybacterium faecium DSM 4810, complete genomeribonucleoside-diphosphate reductase class Ib beta subunit2e-106385
NC_011134:533679:5479105479105489231014Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeribonucleotide reductase of class Ib (aerobic) beta subunit NrdF1e-93343
NC_012470:1635516:1644085164408516450981014Streptococcus equi subsp. zooepidemicus, complete genomeribonucleoside-diphosphate reductase beta subunit4e-93341
NC_015975:1593797:159447915944791595432954Lactobacillus ruminis ATCC 27782 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta1e-87323
NC_014448:803106:8173778173778184111035Mycoplasma hyorhinis HUB-1 chromosome, complete genomeRibonucleoside-diphosphate reductase beta chai6e-83307
NC_017190:2130651:215271521527152153632918Bacillus amyloliquefaciens LL3 chromosome, complete genomeribonucleoside-diphosphate reductase (minor subunit)6e-62237
NC_008025:1889891:189193918919391892898960Deinococcus geothermalis DSM 11300, complete genomeRibonucleoside-diphosphate reductase1e-51203
NC_018720:176306:2310532310532323931341Bifidobacterium asteroides PRL2011 chromosome, complete genomeputative ribonucleotide-diphosphate reductase subunit beta2e-35150
NC_017191:1173989:130493513049351305522588Bacillus amyloliquefaciens XH7 chromosome, complete genomeribonucleotide-diphosphate reductase subunit2e-35149
NC_017188:1172181:130335813033581303945588Bacillus amyloliquefaciens TA208 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta2e-35149
NC_016077:2044876:2062760206276020637881029Acidaminococcus intestini RyC-MR95 chromosome, complete genomeribonucleoside-diphosphate reductase2e-1893.6
NC_003228:3143470:3160425316042531614741050Bacteroides fragilis NCTC 9343, complete genomeribonucleotide-diphosphate reductase beta subunit1e-1687.4
NC_016776:3181706:3197919319791931989681050Bacteroides fragilis 638R, complete genomeputative ribonucleoside-diphosphate reductase beta chain1e-1687.4
NC_006347:3082921:3099134309913431001831050Bacteroides fragilis YCH46, complete genomeribonucleotide-diphosphate reductase beta subunit1e-1687.4
NC_008599:29000:3000730007310291023Campylobacter fetus subsp. fetus 82-40, complete genomeribonucleoside-diphosphate reductase, beta subunit2e-1686.7
NC_014829:4511738:4520330452033045213671038Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeribonucleotide reductase3e-1686.3
NC_009715:1923676:1939527193952719405491023Campylobacter curvus 525.92 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta6e-1685.1
NC_009663:2478311:2492929249292924939481020Sulfurovum sp. NBC37-1, complete genomeribonucleotide-diphosphate reductase subunit beta1e-1584.3
NC_013406:781308:7823497823497833801032Paenibacillus sp. Y412MC10 chromosome, complete genomeRibonucleoside-diphosphate reductase2e-1583.6
NC_017188:1172181:130485613048561305137282Bacillus amyloliquefaciens TA208 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta2e-1583.2
NC_017161:1:2645326453274811029Hydrogenobacter thermophilus TK-6 chromosome, complete genomeribonucleotide reductase2e-1583.2
NC_013799:1:2639226392274201029Hydrogenobacter thermophilus TK-6, complete genomeribonucleotide reductase beta subunit2e-1583.2
NC_009802:1917917:1934770193477019357921023Campylobacter concisus 13826, complete genomeribonucleoside-diphosphate reductase, beta subunit3e-1583.2
NC_009850:11076:2920929209302281020Arcobacter butzleri RM4018, complete genomeribonucleoside-diphosphate reductase, beta chain2e-1480.1
NC_017187:10320:2853728537295561020Arcobacter butzleri ED-1, complete genomeribonucleotide-diphosphate reductase subunit beta7e-1478.2
NC_006177:324363:3582153582153592551041Symbiobacterium thermophilum IAM 14863, complete genomeribonucleoside-diphosphate reductase beta subunit4e-1375.9
NC_010547:98330:1137121137121147551044Cyanothece sp. ATCC 51142 chromosome linear, complete sequenceribonucleoside-diphosphate reductase beta subunit8e-1374.7
NC_013959:2666321:2671821267182126729691149Sideroxydans lithotrophicus ES-1 chromosome, complete genomeRibonucleoside-diphosphate reductase4e-1169.3
NC_013716:2476334:2479843247984324809731131Citrobacter rodentium ICC168, complete genomeribonucleoside-diphosphate reductase 1 beta chain3e-1169.3
NC_009901:2485965:2497455249745524985851131Shewanella pealeana ATCC 700345, complete genomeRibonucleoside-diphosphate reductase8e-1168.2
NC_019902:2372097:2388412238841223896501239Thioalkalivibrio nitratireducens DSM 14787, complete genomeRibonucleotide reductase of class Ia (aerobic), beta subunit5e-1065.5
NC_007794:262402:2884022884022894571056Novosphingobium aromaticivorans DSM 12444, complete genomeRibonucleoside-diphosphate reductase6e-1065.5
NC_014909:540000:5426525426525437821131Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeribonucleoside-diphosphate reductase 1 subunit beta9e-1064.7
NC_020075:590481:5928265928265939561131Candidatus Blochmannia chromaiodes str. 640, complete genomeRibonucleoside-diphosphate reductase 1 subunit beta9e-1064.7
NC_013889:1514799:1531185153118515324231239Thioalkalivibrio sp. K90mix chromosome, complete genomeRibonucleoside-diphosphate reductase1e-0964.3
NC_005061:524704:5309385309385320681131Candidatus Blochmannia floridanus, complete genomeribonucleotide-diphosphate reductase beta subunit1e-0963.9
NC_007347:3204637:3222450322245032236341185Ralstonia eutropha JMP134 chromosome 1, complete sequenceribonucleotide-diphosphate reductase beta subunit2e-0963.5
NC_005085:2457295:2469359246935924704411083Chromobacterium violaceum ATCC 12472, complete genomeribonucleotide-diphosphate reductase beta subunit2e-0963.5
NC_009655:1626466:1643027164302716441571131Actinobacillus succinogenes 130Z chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta2e-0963.2
NC_011901:2739984:2754202275420227554281227Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeribonucleotide-diphosphate reductase subunit beta5e-0962.4
NC_016002:1975000:2016212201621220172941083Pseudogulbenkiania sp. NH8B, complete genomeribonucleoside-diphosphate reductase subunit beta9e-0961.2
NC_012026:415447:4374154374154384461032Anaplasma marginale str. Florida, complete genomeribonuceoside-diphosphate reductase beta chain (nrdB)1e-0860.8
NC_015953:4908069:4932963493296349339851023Streptomyces sp. SirexAA-E chromosome, complete genomeribonucleoside-diphosphate reductase2e-0860.1
NC_009439:3485000:3492649349264934938991251Pseudomonas mendocina ymp, complete genomeribonucleotide-diphosphate reductase subunit beta5e-0858.9
NC_015410:3791500:3798766379876638000161251Pseudomonas mendocina NK-01 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta5e-0858.9
NC_015556:1899850:1908749190874919100051257Pseudomonas fulva 12-X chromosome, complete genomeRibonucleoside-diphosphate reductase8e-0858.2
NC_018080:4280401:4288538428853842897851248Pseudomonas aeruginosa DK2 chromosome, complete genomeribonucleotide-diphosphate reductase subunit beta9e-0857.8
NC_002516:1236644:1249907124990712511541248Pseudomonas aeruginosa PAO1, complete genomeribonucleotide-diphosphate reductase beta subunit9e-0857.8
NC_008463:4389721:4397858439785843991051248Pseudomonas aeruginosa UCBPP-PA14, complete genomeribonucleoside reductase, small chain9e-0857.8
NC_011770:4591500:4597815459781545990621248Pseudomonas aeruginosa LESB58, complete genomeNrdB, tyrosyl radical-harboring component of class Ia ribonucleotide reductase9e-0857.8
NC_015740:1594376:1604475160447516057221248Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeribonucleotide-diphosphate reductase subunit beta1e-0757.4
NC_009434:1743696:1752789175278917540361248Pseudomonas stutzeri A1501, complete genomeribonucleotide-diphosphate reductase subunit beta1e-0757.4