Pre_GI: BLASTP Hits

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Query: NC_009092:3682413:3691980 Shewanella loihica PV-4, complete genome

Start: 3691980, End: 3692801, Length: 822

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:1994392:200497620049762005956981Pseudomonas aeruginosa PA7 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-0963.5
NC_007644:779376:787516787516788487972Moorella thermoacetica ATCC 39073, complete genomeNAD-dependent epimerase/dehydratase2e-0963.2
NC_008781:3688965:369548636954863696433948Polaromonas naphthalenivorans CJ2, complete genomeNAD-dependent epimerase/dehydratase2e-0963.2
NC_005085:4335333:436215943621594363082924Chromobacterium violaceum ATCC 12472, complete genomeprobable nucleotide sugar dehydratase4e-0962
NC_015660:296488:3191793191793202011023Geobacillus thermoglucosidasius C56-YS93 chromosome, completedTDP-glucose 4,6-dehydratase8e-0961.2
NC_014221:169996:187908187908188774867Truepera radiovictrix DSM 17093 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-0961.2
NC_007404:1964935:196988319698831970803921Thiobacillus denitrificans ATCC 25259, complete genomeputative UDP-glucose 4-epimerase2e-0859.7
NC_014931:5088125:510010351001035101062960Variovorax paradoxus EPS chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-0859.7
NC_014973:1767798:177259617725961773558963Geobacter sp. M18 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-0859.7
NC_007948:4176579:417950841795084180470963Polaromonas sp. JS666, complete genomeNAD-dependent epimerase/dehydratase3e-0859.3
NC_005363:1604337:161505316150531616036984Bdellovibrio bacteriovorus HD100, complete genomeprobable UDP-glucose 4-epimerase3e-0859.3
NC_019960:1658657:172607417260741727069996Prevotella dentalis DSM 3688 chromosome 1, complete sequencenucleoside-diphosphate-sugar epimerase3e-0858.9
NC_012918:3009211:301938130193813020346966Geobacter sp. M21 chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-0858.9
NC_011884:2051723:2062358206235820633681011Cyanothece sp. PCC 7425, complete genomeNAD-dependent epimerase/dehydratase4e-0858.9
NC_013158:1085937:108875110887511089698948Halorhabdus utahensis DSM 12940, complete genomeNAD-dependent epimerase/dehydratase4e-0858.9
NC_008268:6149576:6173100617310061741401041Rhodococcus sp. RHA1, complete genomeprobable UDP-glucose 4-epimerase4e-0858.5
NC_015732:529201:551696551696552694999Spirochaeta caldaria DSM 7334 chromosome, complete genomedTDP-glucose 4,6-dehydratase4e-0858.5
NC_013743:1281500:128741212874121288389978Haloterrigena turkmenica DSM 5511, complete genomeNAD-dependent epimerase/dehydratase4e-0858.5
NC_017506:1996652:2008918200891820099431026Marinobacter adhaerens HP15 chromosome, complete genomeUDP-Glucose 4-empimerase6e-0858.2
NC_008463:2017607:203919620391962040149954Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative NAD dependent epimerase/dehydratase6e-0858.2
NC_009997:3661083:368015936801593681139981Shewanella baltica OS195, complete genomeNAD-dependent epimerase/dehydratase9e-0857.8
NC_014394:3036758:304178930417893042733945Gallionella capsiferriformans ES-2 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-0757.4
NC_015865:1108089:113127911312791132232954Thermococcus sp. 4557 chromosome, complete genomeUDP-glucose 4-epimerase (galE)2e-0757
NC_009620:1504933:151301415130141514006993Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceUDP-glucose 4-epimerase2e-0756.6
NC_007406:2615916:2628719262871926297231005Nitrobacter winogradskyi Nb-255, complete genomeNAD-dependent epimerase/dehydratase2e-0756.2
NC_021175:1973880:198734319873431988218876Streptococcus oligofermentans AS 1.3089, complete genomeUDP-glucose 4-epimerase3e-0756.2
NC_015424:3112637:312666031266603127625966Aeromonas veronii B565 chromosome, complete genomeNAD dependent epimerase/dehydratase3e-0755.8
NC_014012:1676983:170480617048061705723918Shewanella violacea DSS12, complete genomeUDP-glucose 4-epimerase, putative3e-0755.8
NC_009675:5187452:5202638520263852036481011Anaeromyxobacter sp. Fw109-5 chromosome, complete genomedTDP-glucose 4,6-dehydratase3e-0755.8
NC_009802:1525144:155060615506061551592987Campylobacter concisus 13826, complete genomehypothetical protein3e-0755.8
NC_015680:1108971:111108211110821112029948Pyrococcus yayanosii CH1 chromosome, complete genomeUDP-glucose 4-epimerase5e-0755.5
NC_015160:3556114:357573835757383576733996Odoribacter splanchnicus DSM 20712 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase4e-0755.5
NC_011060:514874:513879513879514877999Pelodictyon phaeoclathratiforme BU-1, complete genomeNAD-dependent epimerase/dehydratase4e-0755.5
NC_014206:2516000:252610725261072527090984Geobacillus sp. C56-T3 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-0755.1
NC_006510:3133965:314990931499093150904996Geobacillus kaustophilus HTA426, complete genomedTDP-glucose 4,6-dehydratase6e-0755.1
NC_015761:2062345:207908920790892080084996Salmonella bongori NCTC 12419, complete genomeudp-N-acetylglucosamine 4-epimerase6e-0754.7
NC_009925:2728203:2737620273762027386541035Acaryochloris marina MBIC11017, complete genomeNAD-dependent epimerase/dehydratase, putative7e-0754.7
NC_011891:4931961:493751949375194938490972Anaeromyxobacter dehalogenans 2CP-1, complete genomeNAD-dependent epimerase/dehydratase8e-0754.7
NC_014323:4792048:4803297480329748042981002Herbaspirillum seropedicae SmR1 chromosome, complete genomeNAD_dependent epimerase/dehydratase8e-0754.7
NC_013642:400651:430581430581431552972Thermotoga naphthophila RKU-10, complete genomeNAD-dependent epimerase/dehydratase1e-0654.3
NC_011894:4360577:436376943637694364752984Methylobacterium nodulans ORS 2060, complete genomeNAD-dependent epimerase/dehydratase1e-0654.3
NC_017986:1128879:114731411473141148285972Pseudomonas putida ND6 chromosome, complete genomeUDP-sugar epimerase9e-0754.3
NC_015660:391627:399813399813400808996Geobacillus thermoglucosidasius C56-YS93 chromosome, completeUDP-glucose 4-epimerase8e-0754.3
NC_009464:2523092:254966125496612550623963Uncultured methanogenic archaeon RC-I, complete genomedTDP-glucose 4,6-dehydratase8e-0754.3
NC_007517:1468719:1493177149317714941931017Geobacter metallireducens GS-15, complete genomeNAD-dependent epimerase/dehydratase1e-0653.9
NC_011891:4931961:4946983494698349479931011Anaeromyxobacter dehalogenans 2CP-1, complete genomedTDP-glucose 4,6-dehydratase1e-0653.9
NC_012779:1286500:130023913002391301210972Edwardsiella ictaluri 93-146, complete genomeUDP-N-acetylglucosamine 4-epimerase1e-0653.9
NC_007626:68925:8497684976859951020Magnetospirillum magneticum AMB-1, complete genomeNucleoside-diphosphate-sugar epimerase1e-0653.9
NC_012491:5628000:5647320564732056483301011Brevibacillus brevis NBRC 100599, complete genomeputative dTDP-glucose 4,6-dehydratase1e-0653.9
NC_009656:1994392:202461820246182025574957Pseudomonas aeruginosa PA7 chromosome, complete genomeUDP-glucose 4-epimerase2e-0653.5
NC_012969:142000:146031146031147002972Methylovorus glucosetrophus SIP3-4 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-0653.1
NC_014032:825793:843116843116844114999Salinibacter ruber M8 chromosome, complete genomeUDP-glucose 4-epimerase2e-0653.1
NC_010658:1090104:109591810959181096913996Shigella boydii CDC 3083-94, complete genomeUDP-N-acetylglucosamine 4-epimerase3e-0652.8
NC_010498:1035406:104101610410161042011996Escherichia coli SMS-3-5, complete genomeUDP-N-acetylglucosamine 4-epimerase3e-0652.8
NC_011748:2324495:234348923434892344484996Escherichia coli 55989, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)3e-0652.8
NC_010468:1775000:177908517790851780080996Escherichia coli ATCC 8739, complete genomeNAD-dependent epimerase/dehydratase3e-0652.8
NC_002655:2839600:285894328589432859938996Escherichia coli O157:H7 EDL933, complete genomeputative UDP-galactose 4-epimerase3e-0652.8
CU928145:2324495:234348923434892344484996Escherichia coli 55989 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)3e-0652.8
NC_002695:2769387:278872927887292789724996Escherichia coli O157:H7 str. Sakai, complete genomeputative UDP-galactose 4-epimerase3e-0652.8
CU928160:2155947:217411521741152175110996Escherichia coli IAI1 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)3e-0652.8
NC_011353:2734222:275356427535642754559996Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase3e-0652.8
NC_011601:2211917:223361622336162234611996Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeUDP-galactose 4-epimerase3e-0652.8
NC_011741:2155947:217411521741152175110996Escherichia coli IAI1 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)3e-0652.8
NC_011745:2302979:232202923220292323024996Escherichia coli ED1a chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase (UDP-GlcNAc 4-epimerase)3e-0652.8
NC_013008:2733203:275254527525452753540996Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase3e-0652.8
NC_013941:2544569:256931625693162570311996Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeUDP-N-acetylglucosamine 4-epimerase3e-0652.8
NC_011145:1732499:175641317564131757225813Anaeromyxobacter sp. K, complete genomeNAD-dependent epimerase/dehydratase3e-0652.8
NC_011663:1709003:173143917314391732401963Shewanella baltica OS223 chromosome, complete genomeNAD-dependent epimerase/dehydratase3e-0652.8
NC_005070:419261:449194449194450189996Synechococcus sp. WH 8102, complete genomePutative nucleotide sugar epimerase4e-0652.4
NC_019904:5241444:525005552500555251035981Echinicola vietnamensis DSM 17526 chromosome, complete genomenucleoside-diphosphate-sugar epimerase3e-0652.4
NC_018870:271323:275885275885276835951Thermacetogenium phaeum DSM 12270 chromosome, complete genomeUDP-glucuronate 5'-epimerase3e-0652.4
NC_009523:5104413:511309951130995114085987Roseiflexus sp. RS-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-0652
NC_009138:1138917:116755111675511168489939Herminiimonas arsenicoxydans, complete genomeUDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase)4e-0652
NC_014976:759129:779393779393780373981Bacillus subtilis BSn5 chromosome, complete genomeNAD dependent epimerase4e-0652
NC_003078:671000:6934726934726945211050Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative sugar nucleotide epimerase dehydratase protein4e-0652
NC_008596:6009511:6041185604118560422131029Mycobacterium smegmatis str. MC2 155, complete genomeepimerase/dehydratase4e-0652
NC_009648:838000:8585368585368595521017Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeUDP-galactose-4-epimerase5e-0651.6
NC_013093:7437033:744188474418847442876993Actinosynnema mirum DSM 43827, complete genomedTDP-glucose 4,6-dehydratase7e-0651.2
NC_019942:686564:689090689090689968879Aciduliprofundum sp. MAR08-339, complete genomenucleoside-diphosphate-sugar epimerase8e-0651.2
NC_017323:599549:6211116211116221601050Sinorhizobium meliloti BL225C plasmid pSINMEB02, complete sequenceNAD-dependent epimerase/dehydratase8e-0651.2
NC_007626:68925:7047870478714941017Magnetospirillum magneticum AMB-1, complete genomeNucleoside-diphosphate-sugar epimerase9e-0650.8