Pre_GI: BLASTP Hits

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Query: NC_009092:3239500:3242067 Shewanella loihica PV-4, complete genome

Start: 3242067, End: 3242948, Length: 882

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009092:1935281:1935281193528119381872907Shewanella loihica PV-4, complete genomeMicrobial collagenase3e-57222
NC_004460:1237129:1241731124173112441542424Vibrio vulnificus CMCP6 chromosome II, complete sequencehypothetical protein3e-51202
NC_005140:1820970:1825580182558018280152436Vibrio vulnificus YJ016 chromosome II, complete sequenceputative exoprotease Vcc5e-50198
NC_003888:6470909:6477438647743864800352598Streptomyces coelicolor A3(2), complete genomeprobable secreted protease3e-49195
NC_007435:2701242:2721850272185027236671818Burkholderia pseudomallei 1710b chromosome II, complete sequencesubfamily M9A unassigned peptidase9e-49194
NC_009075:937782:9576209576209596051986Burkholderia pseudomallei 668 chromosome II, complete sequencecollagenase9e-49194
NC_014815:4621552:4639058463905846416372580Micromonospora sp. L5 chromosome, complete genomemicrobial collagenase., xanthomonalisin7e-49194
NC_009078:862796:8834958834958854321938Burkholderia pseudomallei 1106a chromosome II, complete sequencecollagenase1e-48193
NC_006351:881655:9023579023579042941938Burkholderia pseudomallei K96243 chromosome 2, complete sequencecollagenase1e-48193
NC_004605:741000:7421107421107442272118Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative collagenase1e-45183
NC_009348:4011160:4012276401227640150232748Aeromonas salmonicida subsp. salmonicida A449, complete genomecollagenase1e-35150
NC_015424:525039:5261745261745289332760Aeromonas veronii B565 chromosome, complete genomeCollagenase family8e-35147
NC_008570:546736:5479285479285506752748Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomecollagenase family1e-34147