Pre_GI: BLASTP Hits

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Query: NC_009092:2529518:2536250 Shewanella loihica PV-4, complete genome

Start: 2536250, End: 2536765, Length: 516

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:1287714:131233113123311312861531Escherichia coli ED1a chromosome, complete genomedisulfide bond formation protein B4e-36150
NC_014500:2525880:254457025445702545100531Dickeya dadantii 3937 chromosome, complete genomeoxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I1e-35149
NC_011601:1315746:133906813390681339598531Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomedisulfide bond formation protein B1e-35148
NC_020211:2985157:299872429987242999254531Serratia marcescens WW4, complete genomeoxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I1e-34145
NC_015663:4735808:474003047400304740560531Enterobacter aerogenes KCTC 2190 chromosome, complete genomedisulfide bond formation protein B3e-34144
NC_020181:734477:745653745653746132480Enterobacter aerogenes EA1509E, complete genomePeriplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation2e-31134
NC_006512:1942000:195627219562721956817546Idiomarina loihiensis L2TR, complete genomeDisulfide bond formation protein6e-28123
NC_013282:2582720:258856725885672589100534Cronobacter turicensis, complete genomeDisulfide bond formation protein B2e-26118
NC_004347:4007847:401637740163774017015639Shewanella oneidensis MR-1, complete genomedisulfide bond formation protein3e-1478.2
NC_011745:3627438:363158036315803632251672Escherichia coli ED1a chromosome, complete genomeputative disulfide oxidoreductase3e-1374.7
NC_009802:1977596:199207619920761992696621Campylobacter concisus 13826, complete genometetrathionate reductase subunit A5e-1270.5
NC_015222:2683056:268305626830562683574519Nitrosomonas sp. AL212 chromosome, complete genomedisulfide bond formation protein DsbB9e-0959.7
NC_015731:3077842:308105130810513081524474Nitrosomonas sp. Is79A3 chromosome, complete genomeDisulfide bond formation protein B3e-0754.7
NC_007511:3512100:351553335155333516039507Burkholderia sp. 383 chromosome 2, complete sequenceDisulphide bond formation protein DsbB3e-0754.7
NC_012559:1663214:166627116662711666780510Laribacter hongkongensis HLHK9, complete genomedisulfide bond formation protein DsbB3e-0754.7
NC_004129:5781413:579694457969445797432489Pseudomonas fluorescens Pf-5, complete genomedisulfide bond formation protein B8e-0650.1
NC_015276:632206:632206632206632700495Marinomonas mediterranea MMB-1 chromosome, complete genomeDisulfide bond formation protein B8e-0649.7