Pre_GI: BLASTP Hits

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Query: NC_009092:2282437:2299200 Shewanella loihica PV-4, complete genome

Start: 2299200, End: 2299805, Length: 606

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009052:2512373:254857625485762549202627Shewanella baltica OS155, complete genomecytochrome c oxidase, cbb3-type, subunit II1e-94345
NC_016745:2229271:223341822334182234026609Oceanimonas sp. GK1 chromosome, complete genomecbb3-type cytochrome c oxidase subunit II1e-89328
NC_014541:2122788:213714321371432137754612Ferrimonas balearica DSM 9799 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit II2e-88324
NC_012560:1965251:198681519868151987423609Azotobacter vinelandii DJ, complete genomecytochrome c oxidase, cbb3-type, subunit II2e-85314
NC_021150:1965264:198682819868281987436609Azotobacter vinelandii CA6, complete genomecytochrome c oxidase, cbb3-type, subunit II2e-85314
NC_007492:2035761:203883820388382039446609Pseudomonas fluorescens PfO-1, complete genomeCytochrome C oxidase, mono-heme subunit/FixO4e-81300
NC_005773:3851433:386749938674993868107609Pseudomonas syringae pv. phaseolicola 1448A, complete genomecytochrome c oxidase, cbb3-type, subunit II1e-80298
NC_004578:2185907:218590721859072186515609Pseudomonas syringae pv. tomato str. DC3000, complete genomecytochrome c oxidase, cbb3-type, subunit II3e-80297
NC_007005:4062311:407938740793874079995609Pseudomonas syringae pv. syringae B728a, complete genomeCytochrome C oxidase, mono-heme subunit/FixO5e-78290
NC_009379:435404:447437447437448087651Polynucleobacter sp. QLW-P1DMWA-1, complete genomecytochrome c oxidase, cbb3-type, subunit II5e-76283
NC_008782:1136732:114135311413531141985633Acidovorax sp. JS42, complete genomecytochrome c oxidase, cbb3-type, subunit II3e-73274
NC_011992:1038985:104360910436091044241633Acidovorax ebreus TPSY, complete genomecytochrome c oxidase, cbb3-type, subunit II3e-73274
NC_015422:1163752:117188711718871172519633Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome c oxidase, cbb3-type subunit II1e-72271
NC_014910:3458475:347183434718343472466633Alicycliphilus denitrificans BC chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit ii1e-72271
NC_007298:778723:785031785031785666636Dechloromonas aromatica RCB, complete genomeCytochrome C oxidase, mono-heme subunit/FixO1e-65249
NC_008702:1432952:146203614620361462671636Azoarcus sp. BH72, complete genomeprobable cytochrome c oxidase, cbb3-type,subunit II1e-64246
NC_012848:320883:341894341894342628735Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,cytochrome c oxidase, cbb3-type, subunit II3e-57221
NC_009465:29735:412314123141962732Candidatus Vesicomyosocius okutanii HA, complete genomecbb3-type cytochrome c oxidase subunit II5e-56216
NC_013422:2004478:201479020147902015521732Halothiobacillus neapolitanus c2, complete genomecytochrome c oxidase, cbb3-type, subunit II4e-54210
NC_014934:2223822:2223822222382222260202199Cellulophaga algicola DSM 14237 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit i9e-53206
NC_010118:133256:1469581469581491682211Candidatus Sulcia muelleri GWSS, complete genomebifunctional cytochrome c oxidase subunits ccoN/O3e-52204
NC_020126:7896447:7918373791837379207332361Myxococcus stipitatus DSM 14675, complete genomebifunctional cbb3-type cytochrome c oxidase subunit I/II4e-52204
NC_008095:6877388:6889429688942968918102382Myxococcus xanthus DK 1622, complete genomecytochrome c oxidase, cbb3-type, subunit I/II7e-49193
NC_011146:1429836:143171814317181432578861Geobacter bemidjiensis Bem, complete genomecytochrome c oxidase, cbb3-type, subunit II3e-48191
NC_009714:1329573:133220013322001332868669Campylobacter hominis ATCC BAA-381, complete genomecbb3-type cytochrome c oxidase subunit II2e-38159
NC_014166:3072703:308225730822573082940684Arcobacter nitrofigilis DSM 7299 chromosome, complete genomecbb3-type cytochrome c oxidase subunit II4e-38157
NC_012856:2266187:226783622678362268459624Ralstonia pickettii 12D chromosome 1, complete genomecytochrome C oxidase mono-heme subunit/FixO2e-24112
NC_012660:2045398:2065341206534120666301290Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cytochrome C oxidase (monoheme and diheme subunits)1e-23109
NC_006513:1695487:171785717178571718462606Azoarcus sp. EbN1, complete genomecytochrome oxidase, cytochrome c subunit7e-22103
NC_020541:1827689:184740418474041848036633Rhodanobacter sp. 2APBS1, complete genomeCbb3-type cytochrome oxidase, cytochrome c subunit1e-2099.8
NC_015458:1938860:193886019388601939501642Pusillimonas sp. T7-7 chromosome, complete genomecytochrome C oxidase, mono-heme subunit/FixO1e-1892.8
NC_012440:373863:375269375269376000732Persephonella marina EX-H1, complete genomecytochrome c oxidase, Cbb3-type, subunit II3e-1788.6
NC_012483:996555:1034387103438710363121926Acidobacterium capsulatum ATCC 51196, complete genomecytochrome C family protein4e-1787.8